DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and ZNF189

DIOPT Version :9

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_003443.2 Gene:ZNF189 / 7743 HGNCID:12980 Length:626 Species:Homo sapiens


Alignment Length:551 Identity:194/551 - (35%)
Similarity:280/551 - (50%) Gaps:78/551 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLANVDQRPVKDEPPQEDTFEEELIFISNSDFEELESEIK-------------------IENFC 46
            :|:.|.|    |||.|   |.::|:        ||:|.|::                   .|.|.
Human    53 LDVLNRD----KDEEP---TVKQEI--------EEIEEEVEPQGVIVTRIKSEIDQDPMGRETFE 102

  Fly    47 SYGKDLEPVKG-----VPSKLKTCKSK-------IAKKRPLRKQTDTFKCTQCQKTFTRKENLES 99
            ..|: |:..:|     :|.:..|.:.:       |.:||| ..:....||.:|.|.|.||.:...
Human   103 LVGR-LDKQRGIFLWEIPRESLTQEQRMFRENTNIIRKRP-NSEEKCHKCEECGKGFVRKAHFIQ 165

  Fly   100 HLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGER 163
            |.|:|..|:||:|:.|.|||.|.:....|...|. :||::|::|.|||:.:|:|.:|...|||||
Human   166 HQRVHTGEKPFQCNECGKSFSRSSFVIEHQRIHTGERPYECNYCGKTFSVSSTLIRHQRIHTGER 230

  Fly   164 PFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSK 228
            |::|.||..||:::..|..|.|.|:.|:|.:|:.|.|||...|||.||.|||...:|:.|:.|.|
Human   231 PYQCNQCKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFSWKSHLIEHQRTHTGEKPYHCTKCKK 295

  Fly   229 SFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQ 292
            ||...|:|.:|...| .||..||.:|.|.|..:..|..|.::|.||.||.|..|.::|:|:|.|.
Human   296 SFSRNSLLVEHQRIHTGERPHKCGECGKAFRLSTYLIQHQKIHTGEKPFLCIECGKSFSRSSFLI 360

  Fly   293 LHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHT-- 355
            .|...|.|:.|.:|.:|..:|:.......|.|:||.::.:||.||.|:|.:.|.|::||::||  
Human   361 EHQRIHTGERPYQCKECGKSFSQLCNLTRHQRIHTGDKPHKCEECGKAFSRSSGLIQHQRIHTRE 425

  Fly   356 --------------------------GERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCS 394
                                      .|:.:||..|.|.|....||..|...|.|||...|:.|.
Human   426 KTYPYNETKESFDPNCSLVIQQEVYPKEKSYKCDECGKTFSVSAHLVQHQRIHTGEKPYLCTVCG 490

  Fly   395 KEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEH 459
            |.|..||.|:.|.:.|||:..:.|..|.||::....|..|...|||..|.||..|.|.|:|::..
Human   491 KSFSRSSFLIEHQRIHTGERPYLCRQCGKSFSQLCNLIRHQGVHTGNKPHKCDECGKAFSRNSGL 555

  Fly   460 QEHLRTHTGEKPYKCSHCSTRYTQKSSLGRH 490
            .:|.|.|||||||||..|...::|:.||..|
Human   556 IQHQRIHTGEKPYKCEKCDKSFSQQRSLVNH 586

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 166/433 (38%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
zf-H2C2_2 179..204 CDD:290200 11/24 (46%)
C2H2 Zn finger 195..215 CDD:275368 11/19 (58%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 6/17 (35%)