DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp426

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001073412.1 Gene:Zfp426 / 690895 RGDID:1590942 Length:553 Species:Rattus norvegicus


Alignment Length:504 Identity:157/504 - (31%)
Similarity:244/504 - (48%) Gaps:40/504 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLANVDQRPVKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKTCK 66
            :||.|..:.:|   |...::.|:..|.:.......|.:|::|..||           .|:.:..:
  Rat    75 NLATVGYQLIK---PSVISWLEQEEFSTGQKIVFPEWKIQLETQCS-----------ASQQELLR 125

  Fly    67 SKIAKKRPLRKQTDTFK--C--TQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKR 127
            ..|:.....:..:||.:  |  ||....|:....|.:.::....:..::.|.|.|.|        
  Rat   126 GNISNGMQTQTGSDTGRGLCDGTQYGDFFSELSPLRTVMKTRPAQDNYDSSQCRKDF-------- 182

  Fly   128 HLLKHEKRPHKCS-HCSKTFTQNSSL-----KQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRT 186
             |:...|   ||: .....|.|:...     |.:....|.|:.|:|:.|..||..:||||.|.||
  Rat   183 -LMLQRK---KCAGEKLSEFNQSEETGAIPGKAYQKMATQEKCFECSDCGKSFMNQSHLQTHQRT 243

  Fly   187 HSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKC 250
            ||.::.:|...|.::| .||.|...:.|....:|.:|..|.|.::..:.|..|:.|| .|:.::|
  Rat   244 HSGDKLYELNECGRSF-INSRLAVLIETLNAKKPHRCKECGKGYRYPAYLNIHMRTHTGEKPYEC 307

  Fly   251 TQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAM 315
            .:|.|.|..::|.|||.|.|.||.|:.|..|.:.|.::|.|.:|:..|.|.:|..|.:|...|..
  Rat   308 KECGKAFNYSNSFQIHGRTHTGEKPYVCNQCGKAFTQHSGLSIHVRSHNGDKPYACKECGKAFLT 372

  Fly   316 RSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHML 380
            .|....|:|.||.|:.:.|.:|.|:|...|:|..|.::|..|:..:|..|.|.|...:.|..||.
  Rat   373 SSRLIQHIRTHTGEKPFVCVKCGKAFAISSNLNGHLKMHAEEKTCECKICGKAFGYLSCLNNHMR 437

  Fly   381 DHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFK 445
            .|..:|...|..|.|.|..|:.|.:|::.|||:..:||..|.|:::.|::..:|.||||||.|::
  Rat   438 THNAKKSYTCKECGKAFNYSTHLKIHMRIHTGEKPYECKQCGKAFSHSTSFQIHERTHTGEKPYE 502

  Fly   446 CSHCSKLFARSAEHQEH--LRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            |..|.|.|...:..:.|  ..|||.||||||..|...|:...||.||.|
  Rat   503 CKECGKAFICPSSFRIHEISHTHTEEKPYKCQQCGKAYSHPRSLRRHER 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 136/416 (33%)
C2H2 Zn finger 84..104 CDD:275368 5/21 (24%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 4/25 (16%)
C2H2 Zn finger 167..187 CDD:275368 10/19 (53%)
C2H2 Zn finger 195..215 CDD:275368 5/19 (26%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 5/21 (24%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
Zfp426NP_001073412.1 KRAB 40..97 CDD:214630 6/24 (25%)
zf-C2H2 222..244 CDD:395048 11/21 (52%)
C2H2 Zn finger 224..244 CDD:275368 10/19 (53%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
zf-H2C2_2 291..316 CDD:463886 9/24 (38%)
C2H2 Zn finger 307..327 CDD:275368 9/19 (47%)
COG5048 <331..483 CDD:227381 51/151 (34%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 7/19 (37%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
zf-H2C2_2 487..512 CDD:463886 12/24 (50%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
C2H2 Zn finger 533..553 CDD:275368 8/19 (42%)

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