DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Zfp442

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_011238043.1 Gene:Zfp442 / 668923 MGIID:3651999 Length:673 Species:Mus musculus


Alignment Length:416 Identity:172/416 - (41%)
Similarity:243/416 - (58%) Gaps:8/416 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSF----GRRTHYKRHLLKHEKRPHKCSHC 142
            ::|.||.|.|::..:|:.|.|.|..|:|:||..|.|||    |.:.|.|.|   |.::.::|..|
Mouse   245 YECNQCGKAFSQNSSLQLHKRTHTGEKPYECKQCGKSFACQSGLQQHKKTH---HGEKSYECKRC 306

  Fly   143 SKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSH 207
            .|.|...|.|:||...||||:.::|.||..:||.:.||:.|.|.|:.|:|::|..|.|.|..::|
Mouse   307 GKAFACQSDLQQHKRTHTGEKSYECNQCDKAFALRCHLRRHQRIHTVEKPYKCNQCGKFFAQSNH 371

  Fly   208 LQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFLQNDSLQIHLRVHA 271
            ...|.|||...:|::|:.|.|:|..::.|..|..||: |:.:.|.:|.|.|:....||||.|.|.
Mouse   372 FVRHKRTHTGEKPYECNQCDKAFACQTSLLYHKRTHSGEKLYVCNECGKAFVLQSYLQIHKRTHT 436

  Fly   272 GEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAE 336
            ||.||.|..|.:.||:||.|..|...|.|::|.:|.||...||..|..:||.:.||.|:.|:|.:
Mouse   437 GEKPFGCDQCDKAFAQNSHLLTHKRTHTGEKPYECEQCGKAFASNSNLQVHKKTHTGEKPYECKQ 501

  Fly   337 CSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSS 401
            |.|:|..:|.|.:|::.||||:|::|..|.|.|.|:..|..|...|.|||..:||.|.|.|.|.|
Mouse   502 CGKAFGFQSGLQKHKRTHTGEKPYECNQCDKAFACQASLLNHKRSHTGEKPYECSECGKAFVLHS 566

  Fly   402 QLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTH 466
            .|.:|.:.|||:..|||..|.|::..::.|..|.|.|||:.|:.|..|.|.||..:..|.|.|||
Mouse   567 YLQIHKRIHTGEKPFECDQCDKAFARNTLLLKHKRIHTGQKPYGCKQCGKAFANHSNLQVHKRTH 631

  Fly   467 TGEKPYKCSHCSTRYTQKSSLGRHLR 492
            ||||||:|.||...:..:|.|..|.|
Mouse   632 TGEKPYECKHCGKPFKCQSGLQYHKR 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 167/400 (42%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 9/23 (39%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 6/17 (35%)
Zfp442XP_011238043.1 KRAB 9..50 CDD:460171
C2H2 Zn finger 83..103 CDD:275368
C2H2 Zn finger 140..159 CDD:275368
C2H2 Zn finger 167..183 CDD:275368
C2H2 Zn finger 191..211 CDD:275368
COG5048 215..595 CDD:227381 142/352 (40%)
C2H2 Zn finger 219..239 CDD:275368
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 331..351 CDD:275368 9/19 (47%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
C2H2 Zn finger 499..519 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
SFP1 <577..660 CDD:227516 36/81 (44%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..658 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.