DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and znf1068

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001104669.1 Gene:znf1068 / 569852 ZFINID:ZDB-GENE-080215-12 Length:419 Species:Danio rerio


Alignment Length:471 Identity:154/471 - (32%)
Similarity:226/471 - (47%) Gaps:70/471 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKDEPPQEDTFEEELIFISNSDFEE------LESEIKIENFC---SYGKDLEPVKGVPSKLKTCK 66
            :|:|  .||...||...:...|.:|      |:.|...:|..   .:.|..|..  ...|....|
Zfish     4 IKEE--SEDVKIEETFTVKQEDLQEQTDLMVLKEETHQQNKMEEKQFEKHQETT--TDEKPTLTK 64

  Fly    67 SKIAKKRPLRKQTD-TFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLL 130
            ...:::||.:.::. ...|.||...|.||.||:.|:|:|..|:|:.|..|.:.|           
Zfish    65 KTSSRRRPRKSESACNLTCRQCGNRFRRKHNLQIHMRIHTGEKPYTCQQCGQCF----------- 118

  Fly   131 KHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFEC 195
                       |:     :.:|..|:..||||:|:.|.||..||....:|:||:|||:.|||:.|
Zfish   119 -----------CT-----SGNLVVHMRLHTGEKPYSCPQCGKSFKHNGNLKVHMRTHTGERPYTC 167

  Fly   196 THCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQ 259
            ..|.:.|....:|..|:|.|...||:.|..|.|||...:.|..|:..| .||.:.|.||.|:|.|
Zfish   168 QQCGQCFYTTGNLAAHMRIHTGERPYTCQQCGKSFYQSANLAAHMRIHTGERPYTCQQCGKSFYQ 232

  Fly   260 NDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVR 324
            :.:|.:|:|:|.||.|:.||.|.::|.:||.|:                            .|:|
Zfish   233 SANLVVHMRIHTGERPYSCPQCGKSFKQNSNLE----------------------------AHIR 269

  Fly   325 LHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPK 389
            .|...|.:.|.:|.|||.:|..|..|.::||||:|:.||.|.|.|:|::.|..||:.|.|||...
Zfish   270 THNGGRSFTCPQCGKSFAQKQDLDLHMRIHTGEKPYTCTECGKSFRCKSALNNHMISHTGEKPFT 334

  Fly   390 CSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFA 454
            |:.|.|.|...:.|..|:..|||...|.|..|.||.|...|:..|::||:||..|:||.|.|.|.
Zfish   335 CAQCGKSFTTKTSLKNHMNGHTGTIVFTCDQCGKSLTRKDTIRNHMKTHSGEDGFRCSECGKGFK 399

  Fly   455 RSAEHQEHLRTHTGEK 470
            .......|::.|.|::
Zfish   400 YKKSLNTHIKLHNGDQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 138/399 (35%)
C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
C2H2 Zn finger 112..132 CDD:275368 3/19 (16%)
C2H2 Zn finger 139..159 CDD:275368 3/19 (16%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 2/19 (11%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 9/19 (47%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368
znf1068NP_001104669.1 C2H2 Zn finger 83..103 CDD:275368 10/19 (53%)
COG5048 107..>411 CDD:227381 123/358 (34%)
C2H2 Zn finger 111..131 CDD:275368 6/46 (13%)
C2H2 Zn finger 139..159 CDD:275368 9/19 (47%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 251..271 CDD:275368 9/47 (19%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
C2H2 Zn finger 307..327 CDD:275368 9/19 (47%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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