DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp235

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001347394.1 Gene:Zfp235 / 56525 MGIID:1929117 Length:772 Species:Mus musculus


Alignment Length:491 Identity:188/491 - (38%)
Similarity:256/491 - (52%) Gaps:31/491 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NVDQRPVKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKTCKSKI 69
            |..|....|.|.|    |.:.:.:.|.                     .||.|.........|.|
Mouse   303 NTGQDAFIDSPSQ----ETQQVLLGNK---------------------SPVHGTYEDTSYTSSVI 342

  Fly    70 AKK-RPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE 133
            .:. .|.||:   :.|.:|.|.|::..||::|.|:|..|:|:.|..|.|||.:.:|...||..|.
Mouse   343 QQSVHPGRKR---YWCQECGKAFSQSSNLQTHQRVHTGEKPYTCPECGKSFNQSSHLYAHLPIHT 404

  Fly   134 -KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTH 197
             ::|:.|.:|.|.|::::.|..|...||||:|:||..|...|.::||||.|.|.|:.|:|::|..
Mouse   405 GEKPYCCDNCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGD 469

  Fly   198 CEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQND 261
            |.|.|..:|:|..|.|.|.|.:|:||..|.|.|.|...|..|...| .|:.:||.:|.|.|....
Mouse   470 CGKCFSCSSNLHTHQRVHTEEKPYKCDECGKRFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSAS 534

  Fly   262 SLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLH 326
            |.|.|.|||.||.||.|..|.:.|:::|..|.|...|.|::|.:|..|...|........|.|:|
Mouse   535 SFQSHQRVHTGEKPFCCSVCGKGFSQSSYFQAHQRVHTGEKPYRCDVCGKRFNWSLNLHNHQRVH 599

  Fly   327 TRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCS 391
            |.||.|||.||.|.|.:.|:|..||.|||||:||:|..|.|.|...:||:.|...|.||:..||.
Mouse   600 TGERPYKCEECGKGFSQASNLQAHQSVHTGEKPFRCNACQKRFSQASHLQAHQRVHTGERPYKCD 664

  Fly   392 YCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARS 456
            .|.|.|...|.|.||...|||:..|:|..|.|.::.|:.|..|.|.||||.|:.|..|.|.|:::
Mouse   665 TCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLTAHQRVHTGEKPYTCQQCGKGFSQA 729

  Fly   457 AEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            :....|.|.||||:||.||.||..::|:|.|..|.|
Mouse   730 SHFHTHQRVHTGERPYICSICSKGFSQRSHLVYHQR 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 169/405 (42%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 8/17 (47%)
Zfp235NP_001347394.1 KRAB 8..48 CDD:460171
COG5048 355..696 CDD:227381 142/340 (42%)
C2H2 Zn finger 355..375 CDD:275368 8/19 (42%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
C2H2 Zn finger 579..599 CDD:275368 5/19 (26%)
C2H2 Zn finger 607..627 CDD:275368 9/19 (47%)
C2H2 Zn finger 635..655 CDD:275368 7/19 (37%)
C2H2 Zn finger 663..683 CDD:275368 8/19 (42%)
SFP1 <685..768 CDD:227516 35/81 (43%)
C2H2 Zn finger 691..711 CDD:275368 7/19 (37%)
C2H2 Zn finger 719..739 CDD:275368 6/19 (32%)
C2H2 Zn finger 747..767 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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