DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp235

DIOPT Version :9

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001347394.1 Gene:Zfp235 / 56525 MGIID:1929117 Length:772 Species:Mus musculus


Alignment Length:491 Identity:188/491 - (38%)
Similarity:256/491 - (52%) Gaps:31/491 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NVDQRPVKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKTCKSKI 69
            |..|....|.|.|    |.:.:.:.|.                     .||.|.........|.|
Mouse   303 NTGQDAFIDSPSQ----ETQQVLLGNK---------------------SPVHGTYEDTSYTSSVI 342

  Fly    70 AKK-RPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE 133
            .:. .|.||:   :.|.:|.|.|::..||::|.|:|..|:|:.|..|.|||.:.:|...||..|.
Mouse   343 QQSVHPGRKR---YWCQECGKAFSQSSNLQTHQRVHTGEKPYTCPECGKSFNQSSHLYAHLPIHT 404

  Fly   134 -KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTH 197
             ::|:.|.:|.|.|::::.|..|...||||:|:||..|...|.::||||.|.|.|:.|:|::|..
Mouse   405 GEKPYCCDNCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGD 469

  Fly   198 CEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQND 261
            |.|.|..:|:|..|.|.|.|.:|:||..|.|.|.|...|..|...| .|:.:||.:|.|.|....
Mouse   470 CGKCFSCSSNLHTHQRVHTEEKPYKCDECGKRFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSAS 534

  Fly   262 SLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLH 326
            |.|.|.|||.||.||.|..|.:.|:::|..|.|...|.|::|.:|..|...|........|.|:|
Mouse   535 SFQSHQRVHTGEKPFCCSVCGKGFSQSSYFQAHQRVHTGEKPYRCDVCGKRFNWSLNLHNHQRVH 599

  Fly   327 TRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCS 391
            |.||.|||.||.|.|.:.|:|..||.|||||:||:|..|.|.|...:||:.|...|.||:..||.
Mouse   600 TGERPYKCEECGKGFSQASNLQAHQSVHTGEKPFRCNACQKRFSQASHLQAHQRVHTGERPYKCD 664

  Fly   392 YCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARS 456
            .|.|.|...|.|.||...|||:..|:|..|.|.::.|:.|..|.|.||||.|:.|..|.|.|:::
Mouse   665 TCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLTAHQRVHTGEKPYTCQQCGKGFSQA 729

  Fly   457 AEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            :....|.|.||||:||.||.||..::|:|.|..|.|
Mouse   730 SHFHTHQRVHTGERPYICSICSKGFSQRSHLVYHQR 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 169/405 (42%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
zf-H2C2_2 179..204 CDD:290200 12/24 (50%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 8/17 (47%)
Zfp235NP_001347394.1 KRAB 8..48 CDD:307490
COG5048 355..696 CDD:227381 142/340 (42%)
C2H2 Zn finger 355..375 CDD:275368 8/19 (42%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
C2H2 Zn finger 467..487 CDD:275368 8/19 (42%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
C2H2 Zn finger 579..599 CDD:275368 5/19 (26%)
C2H2 Zn finger 607..627 CDD:275368 9/19 (47%)
C2H2 Zn finger 635..655 CDD:275368 7/19 (37%)
C2H2 Zn finger 663..683 CDD:275368 8/19 (42%)
SFP1 <685..768 CDD:227516 35/81 (43%)
C2H2 Zn finger 691..711 CDD:275368 7/19 (37%)
C2H2 Zn finger 719..739 CDD:275368 6/19 (32%)
C2H2 Zn finger 747..767 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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