DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and znf983

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001121715.2 Gene:znf983 / 560276 ZFINID:ZDB-GENE-060503-812 Length:743 Species:Danio rerio


Alignment Length:681 Identity:203/681 - (29%)
Similarity:292/681 - (42%) Gaps:211/681 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DQRPVKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKT---CKSK 68
            |..|.:.:  ||||  ||||.:.....|..|.|.|.:              |.|:.||   .:..
Zfish     3 DPEPCRIK--QEDT--EELIDVKEESEELNEDEEKHQ--------------VKSEEKTQSETEQS 49

  Fly    69 IAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE 133
            |:.|   ....::..||||.|:||||..|..|:|:|..|:||:|.||...|....:.|.|:..|.
Zfish    50 ISVK---ATAVNSLTCTQCGKSFTRKSGLNDHMRIHTGEKPFKCPHCDWRFNSLRNLKSHIRLHT 111

  Fly   134 -KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFK------------------------------- 166
             ::||:||||||.|..:..||.||..||||:||:                               
Zfish   112 GEKPHQCSHCSKRFNHSGQLKSHLRIHTGEKPFECSHCGKRFSVSKNMKAHERIHTEEKPYHCTA 176

  Fly   167 -----------------------------------------------------------CTQCST 172
                                                                       ||||..
Zfish   177 CGMTFSYLSSLQKHTLNCQNVTVKEESEELNEDVKSEEKTQSETEHSISVKGTAVNSWTCTQCGK 241

  Fly   173 SFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQ 237
            |.:.||.|..|:|.|:.|:|::|:||.|.|.|:::|:.|.|.|.|.:|::||||.|.|.....|:
Zfish   242 SLSCKSALNTHMRIHTGEKPYQCSHCGKRFSNSAYLKSHKRIHTEEKPYQCSHCDKRFSFSQNLK 306

  Fly   238 KHLLTHA----------------------------------------------ERSFKCTQCPKT 256
            .||.||.                                              :::|.||:|.|:
Zfish   307 THLRTHTGEKPYHCTACGKSFRHMSSLQTHTRNHHNVMVEGSEDKEKHHVTSKQKTFNCTECGKS 371

  Fly   257 FLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRV 321
            |.:...|..||::|:||:|:||.||.:||.|...|::|...|.|::|.:||.|...|...::.:.
Zfish   372 FKRKYHLIFHLKIHSGENPYKCSHCDKTFKRLGLLKVHERTHTGEKPYQCSHCDKRFRCTNVRKA 436

  Fly   322 HVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEK 386
            |..:||.|..|||:.|:|:|.....|..|::.||||:|:||:||.|.|:..:..:||...|.|||
Zfish   437 HEMIHTGEELYKCSHCNKTFRYSGLLKVHERTHTGEKPYKCSHCEKRFRSSSGKKVHERTHTGEK 501

  Fly   387 VPKCSYCSKEFKLSSQLLVHLQEHTGKNQFE---------------------------------- 417
            ...||.|.|.|:.|.||:.|.:.|||:..:.                                  
Zfish   502 PFPCSRCKKRFRDSRQLIKHERVHTGEKPYPCNACGKRFRQSSTLRAHTVNIHNVKEKMDNHSIH 566

  Fly   418 -------CPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCS 475
                   |..|.||:.|.|.|:.|.:.|.||.||.|:.|.:.|..|::..||:.|||||||::|.
Zfish   567 TTEKLHLCSECGKSFATQSYLNAHQKIHFGEKPFTCTQCGRSFRYSSQLNEHMMTHTGEKPHECD 631

  Fly   476 HCSTRYTQKSSL----GRHLRR-----TLCG 497
            .|..|:.:.|:|    |.|.:.     .:||
Zfish   632 QCGKRFLKASNLKVHFGVHTKEKPYPCPVCG 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 175/581 (30%)
C2H2 Zn finger 84..104 CDD:275368 12/19 (63%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 11/19 (58%)
C2H2 Zn finger 167..187 CDD:275368 10/19 (53%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 7/21 (33%)
znf983NP_001121715.2 None

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