DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp879

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001128072.1 Gene:Zfp879 / 497896 RGDID:1563273 Length:555 Species:Rattus norvegicus


Alignment Length:540 Identity:178/540 - (32%)
Similarity:257/540 - (47%) Gaps:73/540 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TFEEELIFISNSDFEELE-------SEIKIENFCSYGK--DLEPVKGVPSKLKTCK--------- 66
            ||.:..:..|..::..|:       .|:.:||:.:...  .|.|...|.|:|:...         
  Rat    15 TFRDVAVSFSQDEWLHLDPAQRTLYREVMLENYSNLASLGILSPKPKVISQLEQADFQMVESGMF 79

  Fly    67 ---------------SKIAKKRPLRKQ--TDTF------KCT---QCQKTFTRKENLESHLRLHA 105
                           ||...|..|:.|  .|.|      .|.   |.::....::||.|.:.|..
  Rat    80 QGVYLGWKSLFEPRVSKKENKEVLKHQRVDDLFGFLLGKPCVNEEQLEEQPGYRKNLFSEMLLFL 144

  Fly   106 EERPFECSHCSKSFGR----RTHYKRHLLKHEKRP--------------------HKCSHCSKTF 146
            ..   :|:| .:.|..    |...|..::...::|                    :||:.|.|.|
  Rat   145 RR---DCTH-ERGFPGIELVRNPRKTRVVSEGRKPRSPQYSILFRQLGFNAVHKLYKCNICGKGF 205

  Fly   147 TQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEH 211
            ..:|||.:|...||||:.::|.:|..:|::.|.|..|||.|:.|:|:.|:.|.|||...:.|..|
  Rat   206 LHSSSLSKHQRIHTGEKLYQCKECRKAFSQSSSLTQHLRVHTGEKPYVCSECGKAFSFTTSLIGH 270

  Fly   212 LRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDP 275
            .|.|...||::|..|.|:||..|.|..|...| .|:.:.|:.|.:.|.|..||..|.|:|.||.|
  Rat   271 QRMHTGERPYRCKECGKTFKGSSSLNNHQRIHTGEKPYTCSVCGRAFSQCSSLIQHQRIHTGEKP 335

  Fly   276 FKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKS 340
            ::|..|.:.|...|||..|...|.|::|..|:.|...|:..|...:|.|:||.|:.|.|.||.|:
  Rat   336 YECSQCGKAFTSISRLSRHHRIHTGEKPFHCNVCGKVFSYHSALIIHQRIHTGEKPYACKECGKA 400

  Fly   341 FFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLV 405
            |.:.|.|::||::||||:|:||..|.|.|...:.|.:|...|.|||...|..|.|.|...|.:..
  Rat   401 FSQSSALIQHQRIHTGEKPYKCDECGKAFSWISRLNIHHRIHTGEKPYHCKECGKAFSSHSAVNT 465

  Fly   406 HLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEK 470
            |.:.|||:..::|..|.|::..||.|..|.|.||||.||.|..|.|.|.:|:....|.|.|||||
  Rat   466 HRKIHTGEKPYKCSDCEKAFNQSSALIQHQRIHTGEKPFNCKVCGKAFRQSSSLMTHTRIHTGEK 530

  Fly   471 PYKCSHCSTRYTQKSSLGRH 490
            ||||..|...::|.|||..|
  Rat   531 PYKCKTCGKAFSQSSSLANH 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 157/439 (36%)
C2H2 Zn finger 84..104 CDD:275368 5/22 (23%)
C2H2 Zn finger 112..132 CDD:275368 5/23 (22%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
Zfp879NP_001128072.1 KRAB 14..72 CDD:214630 12/56 (21%)
COG5048 194..554 CDD:227381 147/357 (41%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..330 CDD:275368 8/19 (42%)
C2H2 Zn finger 338..358 CDD:275368 7/19 (37%)
C2H2 Zn finger 366..386 CDD:275368 6/19 (32%)
C2H2 Zn finger 394..414 CDD:275368 9/19 (47%)
C2H2 Zn finger 422..442 CDD:275368 6/19 (32%)
C2H2 Zn finger 450..470 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 7/19 (37%)
C2H2 Zn finger 534..554 CDD:275368 7/17 (41%)

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