DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp960

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001005358.2 Gene:Zfp960 / 449000 MGIID:3052731 Length:546 Species:Mus musculus


Alignment Length:406 Identity:165/406 - (40%)
Similarity:235/406 - (57%) Gaps:16/406 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LRKQTDT----FKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKR-HLLKH-- 132
            :||.|.|    ::|.||.|.|.|..||..|.|:|..|:|::|..|.|.|   ||:.. |:.|.  
Mouse   147 IRKGTYTGEKPYECNQCGKAFARHSNLLDHKRIHTGEKPYKCKQCGKDF---THHSTLHIHKRIH 208

  Fly   133 -EKRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECT 196
             .::.:||:.|...    :.|:.|...||||:|:.|.:|..:||....||:|.|||:.|:.::|.
Mouse   209 TREKTYKCNQCMTI----AHLQCHKITHTGEKPYACKKCGKTFAYHKTLQIHERTHTGEKLYQCN 269

  Fly   197 HCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQN 260
            .|.|||..:..||.|.|||...:|::|:.|.|:|.....||.|..|| .|:.::|.||.:.|.|.
Mouse   270 QCAKAFPYHRTLQIHERTHTGEKPYECNQCGKAFACLRNLQNHKTTHTGEKPYECNQCGRAFRQY 334

  Fly   261 DSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRL 325
            ..||.|.|:|.||.||:|..|.:.|||:|.||.|...|.|::|.:|:||...||.....::|.|.
Mouse   335 VYLQCHERIHTGEKPFECNQCGKAFARHSTLQRHKRTHTGEKPYECNQCGKAFACPRYLQIHKRT 399

  Fly   326 HTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKC 390
            ||.|:.|:|.:|.|:|....:|..|::.||||||::|..|.|.|.||::|::|...|.||:..:|
Mouse   400 HTGEKPYECNQCGKAFACHRYLQIHKRTHTGERPYECNQCGKAFTCRSNLQIHKRTHTGERPYEC 464

  Fly   391 SYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFAR 455
            :.|.|.|...|.|.:|.:.|||:..:||..|.|::|....|..|..|||.|.|::|:.|.|.|.|
Mouse   465 NQCGKAFTCRSNLQIHKRTHTGEKPYECNQCGKAFTQFFPLKRHEITHTKEKPYECNQCGKAFTR 529

  Fly   456 SAEHQEHLRTHTGEKP 471
            .:..|.|.||||||||
Mouse   530 HSTLQIHKRTHTGEKP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 165/406 (41%)
C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
C2H2 Zn finger 112..132 CDD:275368 7/20 (35%)
C2H2 Zn finger 139..159 CDD:275368 4/19 (21%)
C2H2 Zn finger 167..187 CDD:275368 8/19 (42%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 9/19 (47%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368
Zfp960NP_001005358.2 KRAB 13..53 CDD:460171
C2H2 Zn finger 133..152 CDD:275368 2/4 (50%)
COG5048 156..525 CDD:227381 148/375 (39%)
C2H2 Zn finger 160..180 CDD:275368 10/19 (53%)
C2H2 Zn finger 188..208 CDD:275368 8/22 (36%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 9/19 (47%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 9/19 (47%)
C2H2 Zn finger 352..372 CDD:275368 9/19 (47%)
C2H2 Zn finger 380..400 CDD:275368 7/19 (37%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 464..484 CDD:275368 7/19 (37%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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