DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and CG4424

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:235 Identity:68/235 - (28%)
Similarity:103/235 - (43%) Gaps:36/235 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EPPQEDTFEEELIFISNSDFEE-----LESE----IKIENF-CSYGKDLE-----PVKGVPSKLK 63
            |||:::..||. ::.:....||     .|.|    :.:|.. ..|.....     |...|..||.
  Fly   124 EPPEDEVLEEG-VWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKLH 187

  Fly    64 TCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRH 128
            .                   |..|...:.||..|::|:|.|.:|||:||..|.|||......|||
  Fly   188 V-------------------CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRH 233

  Fly   129 LLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERP 192
            :.:|. .:|:.|.:|.:.|...:||.:|...|..|||:.|..|...|...|.|::|.:||:.|:|
  Fly   234 IRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKP 298

  Fly   193 FECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKL 232
            ..|..|.|:|....:|..||:|.|.....:.:....:||:
  Fly   299 HICQLCNKSFARIHNLVAHLQTQQHINDPRLTAYLSTFKV 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 53/160 (33%)
C2H2 Zn finger 84..104 CDD:275368 7/19 (37%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 2/10 (20%)
C2H2 Zn finger 250..270 CDD:275368
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
CG4424NP_650859.3 zf-AD 10..92 CDD:462262
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
COG5048 210..>345 CDD:227381 45/129 (35%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.