DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and CG31224

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_732361.1 Gene:CG31224 / 42237 FlyBaseID:FBgn0051224 Length:1784 Species:Drosophila melanogaster


Alignment Length:487 Identity:142/487 - (29%)
Similarity:203/487 - (41%) Gaps:68/487 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKDEPPQEDTFEEELIFISNSDFEELESEIKIENFCSYG--------KDLEPVKGVPSKL--KTC 65
            :|.|..||....|::     .|..||.:::|.......|        .|::|    |::|  |..
  Fly  1337 IKQEQCQEKQDVEQM-----HDHSELLADVKDSELMGIGGDGDGDVDDDIKP----PNQLDEKPT 1392

  Fly    66 KSKIAKKRPLRKQTDTFKCTQC---QKTFTRKENLESHLRLHAEERP-FECSHCSKSFGRRTHYK 126
            ...:|...|..|....::....   .|....:.|| |.|...|.|:. |.|..|...|.....|.
  Fly  1393 LPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNL-SELEQKAMEKSIFLCYVCRTDFPSVKLYD 1456

  Fly   127 RHLLKHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEER 191
            .||.:|   |.:|..|.|.|.:..:...||..|.|.:.|.|..|...|..:|.|..|:|.|:.:.
  Fly  1457 AHLTEH---PAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQT 1518

  Fly   192 PFECTHCEKAFKNNSHLQEHLRTHQE----ARPFKCSHCSKSFKLRSILQKHLLTHAERSFKCTQ 252
            |.:|..|.|.||..|:|.:|.:.|.:    .:.:.| ||.:....::....|..|| :...||  
  Fly  1519 PLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVC-HCGEVLPSKARFLWHKETH-DLKPKC-- 1579

  Fly   253 CPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHL-LEHAGK----EPLKCSQCSAT 312
                                     ||:|.:.|...:.|:.|: |.|:.|    ||::|..|...
  Fly  1580 -------------------------CPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQI 1619

  Fly   313 FAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGE--RPFKCTHCFKDFKCRTHL 375
            ||..|: :.|:..|:.|.||.||.|||||..|.:|..|..||...  :||||.:|.|.|......
  Fly  1620 FAKTSI-KAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDF 1683

  Fly   376 RVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTG 440
            :.|:..|...|...|.||..:|......:.|.:||.|..:|.|..|.||:.....|..|.|.|||
  Fly  1684 KNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTG 1748

  Fly   441 ELPFKCSHCSKLFARSAEHQEHLRTHTGEKPY 472
            |.||.|:.|.|.......|.:||:.|....|:
  Fly  1749 ERPFTCTICGKSSTTKTNHNKHLKIHHSRDPF 1780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 126/414 (30%)
C2H2 Zn finger 84..104 CDD:275368 5/22 (23%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 250..270 CDD:275368 1/19 (5%)
C2H2 Zn finger 278..298 CDD:275368 7/20 (35%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 10/19 (53%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368
CG31224NP_732361.1 C2H2 Zn finger 1466..1486 CDD:275368 6/19 (32%)
C2H2 Zn finger 1494..1514 CDD:275368 7/19 (37%)
zf-H2C2_2 1506..1531 CDD:463886 9/24 (38%)
C2H2 Zn finger 1522..1542 CDD:275368 8/19 (42%)
PHA00733 1527..1623 CDD:177301 30/124 (24%)
C2H2 Zn finger 1554..1573 CDD:275370 4/19 (21%)
C2H2 Zn finger 1580..1599 CDD:275368 6/18 (33%)
C2H2 Zn finger 1613..1632 CDD:275368 6/19 (32%)
COG5048 <1637..1780 CDD:227381 53/142 (37%)
C2H2 Zn finger 1640..1660 CDD:275368 10/19 (53%)
C2H2 Zn finger 1670..1690 CDD:275368 5/19 (26%)
C2H2 Zn finger 1698..1718 CDD:275368 5/19 (26%)
zf-H2C2_2 1710..1733 CDD:463886 8/22 (36%)
C2H2 Zn finger 1726..1746 CDD:275368 7/19 (37%)
C2H2 Zn finger 1754..1774 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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