DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and CG6654

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:517 Identity:134/517 - (25%)
Similarity:204/517 - (39%) Gaps:114/517 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DEPPQEDTF-----------EEELIF-----ISNSDFEELESEIKIENFCSYGKDLEPVKGVPSK 61
            |||.::.|.           |:|::|     |...|..|||.:|:..|...:       :||.::
  Fly   159 DEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIF-------EGVDNE 216

  Fly    62 LKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEE--RPFECSHCSKSFGRRTH 124
            .:.    |....|   |..|.|  ...|..|::||.:....:.::|  |..|.....:| .:||.
  Fly   217 AEI----ITVTAP---QVTTRK--SAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQS-AKRTS 271

  Fly   125 YKRHLLKH--------EKRPHKCSH---------CSKTFTQNSSLKQHLHEHTGERPFKCTQCST 172
            .:|.::|.        :..|....|         ..:..|.|..........|.|..:.|.:|:.
  Fly   272 RRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNA 336

  Fly   173 SFARKSHLQVHLRTHS-EERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSIL 236
            .||.:..|.:|.|... ..|.::|..|||.|.:..||.||..:|   ....|..|......:..|
  Fly   337 GFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASH---GAHNCPECGIRCDSKEAL 398

  Fly   237 QKHLLTHAERSFK--CTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHA 299
            .||::...:|:.:  |..|.|.|....:|:.|:|:|.||.||.|..|.::|.:|:.|:.|.|.  
  Fly   399 SKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLR-- 461

  Fly   300 GKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTH 364
                                      |:..:.:||..|..||..|:.|..|.:.|||::||    
  Fly   462 --------------------------HSETKSFKCELCPHSFVTKAELTSHARTHTGDKPF---- 496

  Fly   365 CFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSS 429
                                    :|..|...|..|..|..|.::|||:..:.|..|...:|..:
  Fly   497 ------------------------ECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALN 537

  Fly   430 TLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHL 491
            .|..|.||||||.|:.|..|||.|.:..:.|.|.|||.||:.|.|..|:..:.....:..||
  Fly   538 VLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 114/425 (27%)
C2H2 Zn finger 84..104 CDD:275368 4/19 (21%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 3/28 (11%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 0/19 (0%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 0/19 (0%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 4/18 (22%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 7/22 (32%)
COG5048 <357..570 CDD:227381 76/271 (28%)
C2H2 Zn finger 360..380 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..490 CDD:275368 16/75 (21%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.