DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Meics

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:337 Identity:125/337 - (37%)
Similarity:181/337 - (53%) Gaps:12/337 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 CTQCSTSFARKSHLQVHLRTHSE----ERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCS 227
            ||:|..|::.:..|..|:..|.|    ::|..|..|.:.|:.|:.|..|.|.|...|||||..|.
  Fly   242 CTECGVSYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCP 306

  Fly   228 KSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRL 291
            |::.....|:.|:.|| .|:..||.||.|||....:|:.|::.|.||.|:|||.|.:|||:||.|
  Fly   307 KAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNSGL 371

  Fly   292 QLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTG 356
            :||...|..:.|.||..|...|........|:|:|..:||:||.:|.||||:||::::||:.|:|
  Fly   372 KLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSG 436

  Fly   357 ERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQ--FECP 419
            .:||||..|.:.|....||:.|:..|.|||..||..|.|.|..:..|:.|...|...|.  |:|.
  Fly   437 IKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFKCS 501

  Fly   420 HCSKSYTTSSTLHMHLRTHTG----ELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTR 480
            .|.|:|.|..:|..|.:||..    :...:|.||...||......:|:.:|. .:|:.|..|...
  Fly   502 QCPKAYDTQQSLRGHEKTHKNPDEPKTLHQCPHCDVRFALKKTLDKHITSHK-IRPHPCPQCPEG 565

  Fly   481 YTQKSSLGRHLR 492
            :..:.||.:|||
  Fly   566 FFSQKSLKKHLR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 119/321 (37%)
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368
C2H2 Zn finger 139..159 CDD:275368
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 11/19 (58%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 10/19 (53%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
SFP1 <296..374 CDD:227516 35/77 (45%)
COG5048 <299..486 CDD:227381 79/186 (42%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 11/19 (58%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
COG5048 <395..583 CDD:227381 65/184 (35%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
C2H2 Zn finger 442..462 CDD:275368 6/19 (32%)
C2H2 Zn finger 470..486 CDD:275368 5/15 (33%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
C2H2 Zn finger 532..552 CDD:275370 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275370 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.