DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and D19B

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:584 Identity:145/584 - (24%)
Similarity:222/584 - (38%) Gaps:165/584 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VDQRPVKDEPP-----QEDTFEEELIFISNSDFEELESEIKIENFCSYGKDLEPV-----KGVP- 59
            |::..::.|.|     |:|:||      |.:| .:|:::.:|.:     .|..|:     :|.. 
  Fly   146 VEEVEMEMEQPFGRVSQDDSFE------SGND-NDLDADFQISS-----DDDIPLAQRSRRGATR 198

  Fly    60 -SKLKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERP----FECSHCSKSF 119
             ||.|. |.|.|.||...:..::.:.:....:....::.....|:.|.||.    .:|..|.:.|
  Fly   199 GSKAKG-KPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIPATERDRHRLIDCHICHQKF 262

  Fly   120 GRRTHYKRHLLKH-EKRPHKCS--HCSKTFTQNSSLKQHL-HEHTGERPF-KCTQ--CSTSFARK 177
            .:...|:.|:..| :..|.:|:  .|.|.||..:.|:.|: |.||..... .||.  |:.||||.
  Fly   263 KKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARP 327

  Fly   178 SHLQVHL-RTH---SEERPFECTHCEKAFKNNSHLQEHLRTHQ-EARPFKCSHCSKSFKLRSILQ 237
            ..|..|: |.|   :.:|.|.||.|||.|:..:.|::|:..|. |..||.|..|.|.|.:.|:|:
  Fly   328 VLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLR 392

  Fly   238 KHLLTHAERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKE 302
            .|||.||                 .::.|:          ||:|.                .|| 
  Fly   393 DHLLRHA-----------------GIKNHV----------CPYCG----------------VGK- 413

  Fly   303 PLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEH-QQVHTGERPFKCTHCF 366
                       ..|..:..|:..||:|::|:|.:|..:...|..|..| :.||...:.|.|.:|.
  Fly   414 -----------TTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCG 467

  Fly   367 KDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEH--------TGKN--------- 414
            |.|......::|...|.|||..:|..|.|.|.....|..||:.|        .|.|         
  Fly   468 KTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLKTHEKRDLPKTQGTNALMGDGASG 532

  Fly   415 --------------------------------------------------QFECPHCSKSYTTSS 429
                                                              |..||.|.|.:...|
  Fly   533 SSTIAKPSPHLRGRVERVDIAQLAGTVANPIPSVNLPSWSPQVNFTKKEGQHICPDCGKGFNHVS 597

  Fly   430 TLHMHLR-THTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            .:.:|.: .|.....|.|..|.|.||:....:.|...|||||||:|..|...:.|:..|..|::
  Fly   598 NMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKVCGKHFRQEQVLKTHMK 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 119/488 (24%)
C2H2 Zn finger 84..104 CDD:275368 1/19 (5%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 8/22 (36%)
C2H2 Zn finger 167..187 CDD:275368 10/22 (45%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 1/19 (5%)
C2H2 Zn finger 278..298 CDD:275368 3/19 (16%)
C2H2 Zn finger 306..326 CDD:275368 2/19 (11%)
C2H2 Zn finger 334..354 CDD:275368 5/20 (25%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
SFP1 <266..365 CDD:227516 34/98 (35%)
C2H2 Zn finger 283..335 CDD:275368 19/51 (37%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
COG5048 <347..512 CDD:227381 60/219 (27%)
C2H2 Zn finger 349..369 CDD:275368 8/19 (42%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 7/47 (15%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 5/19 (26%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 586..607 CDD:275368 6/20 (30%)
C2H2 Zn finger 615..635 CDD:275368 6/19 (32%)
zf-H2C2_2 627..652 CDD:463886 10/24 (42%)
C2H2 Zn finger 643..663 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.