DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and CG10274

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster


Alignment Length:597 Identity:145/597 - (24%)
Similarity:220/597 - (36%) Gaps:142/597 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LANVDQ--RPVKDEPPQEDTFEEELIFI-----SNSDFEELESEIKIENFCSYGKDLEPV----- 55
            |.:||:  ..|:.|..|::....:|:.|     |....|:::.::..|...|.|.|..|:     
  Fly   152 LEHVDKEAEQVEKEVKQDELDAADLMTIFAAESSEESEEDIDQDVDFEPNSSDGDDDVPLAQRLR 216

  Fly    56 ---KGVPSKLKTC---------------------KSKIAKK------RPLRKQTDTFKCTQCQKT 90
               :.:| |.|..                     |||..:|      |.|.:..|   |..|.:.
  Fly   217 DNSRMIP-KAKAAVIKEEDQEFPTGSEEEDEDGEKSKSRRKRIPPGERHLHRIID---CHICHQK 277

  Fly    91 FTRKENLESHLRLHAEERPFEC--SHCSKSF----GRRTHYKRHLLKHEKRPHKCS--HCSKTFT 147
            |.:....|.|::.|.:..||:|  ..|.|.|    |.|.|.. |........|.|:  .|.|||.
  Fly   278 FKKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLHID-HAHTELSEVHSCNVDGCGKTFP 341

  Fly   148 QNSSLKQHLHEHTG-------ERPFKCTQCSTSFARKSHLQVHLRTH-SEERPFECTHCEKAFKN 204
            :...|..|:.:..|       .|.:.||:|...|.....|:.|:..| .:|.||.|..|.|.|..
  Fly   342 RIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELPFPCNICGKRFVI 406

  Fly   205 NSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFLQNDSLQIHLR 268
            ||.|::||..|...:.:.|.:|......|.....|:|||. |:.|||..|........||..|::
  Fly   407 NSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQSLANHIK 471

  Fly   269 -VHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQY 332
             ||.....:.|.:|.:||.::...::|.:.|.|::..:|..|...|........|::.|      
  Fly   472 IVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTH------ 530

  Fly   333 KCAECSKSFFKKSHLVEHQQVHTGERPFK------------------------------CTHCF- 366
                 .|...:.......:||..||.|.:                              |.... 
  Fly   531 -----EKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPVEGISIEPIMSRNAADELLKVCAESVA 590

  Fly   367 ---KDFKCRTHLRVHMLDHIGEKV------------PKCSYCSKEFKLSSQLLVHLQEHTGKNQF 416
               ||  .|...||.:....|..|            |:.::..||.|       |:         
  Fly   591 TIPKD--PRRVQRVDLAQLAGTAVNPIPSVSVPSWSPQVNFTKKEGK-------HI--------- 637

  Fly   417 ECPHCSKSYTTSSTLHMHLR-THTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTR 480
             ||.|.:.:.....:..|.: .|.....|.|..|.|.||::...:.|...||||||::|..|.|.
  Fly   638 -CPGCGQGFNNIGNMKRHYKIIHEKVKDFACRFCPKRFAKAQTLRHHEWIHTGEKPFECKTCGTH 701

  Fly   481 YTQKSSLGRHLR 492
            :.|:::|.||.|
  Fly   702 FRQETALKRHQR 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 115/468 (25%)
C2H2 Zn finger 84..104 CDD:275368 5/19 (26%)
C2H2 Zn finger 112..132 CDD:275368 8/25 (32%)
C2H2 Zn finger 139..159 CDD:275368 7/21 (33%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 5/20 (25%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..326 CDD:275368 4/19 (21%)
C2H2 Zn finger 334..354 CDD:275368 2/19 (11%)
C2H2 Zn finger 362..382 CDD:275368 6/23 (26%)
C2H2 Zn finger 390..410 CDD:275368 4/19 (21%)
C2H2 Zn finger 418..438 CDD:275368 4/20 (20%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 6/18 (33%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
COG5048 394..729 CDD:227381 86/350 (25%)
C2H2 Zn finger 397..417 CDD:275368 9/19 (47%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
C2H2 Zn finger 453..474 CDD:275368 5/20 (25%)
C2H2 Zn finger 482..502 CDD:275368 5/19 (26%)
C2H2 Zn finger 510..530 CDD:275368 4/19 (21%)
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 667..687 CDD:275368 6/19 (32%)
C2H2 Zn finger 695..715 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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