DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Gm5141

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001242994.1 Gene:Gm5141 / 380850 MGIID:3779466 Length:581 Species:Mus musculus


Alignment Length:474 Identity:177/474 - (37%)
Similarity:270/474 - (56%) Gaps:16/474 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EELESEI--KIENFCSYGKDLEPVKGVPSKLK-----------TCKSKIAKKRPLRKQTDTFKCT 85
            |::.||:  .||:|..| ..|:..|...:..|           .|.|.:.:...:......:||.
Mouse   101 EKIPSEVIHCIEDFLPY-TSLQVHKRAQTGQKQYEYKQCGKGFACPSLLKRHERIHTVEKPYKCN 164

  Fly    86 QCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKH-EKRPHKCSHCSKTFTQN 149
            ||.|.|:.|.:|:.|:|.|..|:||:|:.|.|:|....:.:.|...| .::|.||:.|.|.|:|.
Mouse   165 QCDKAFSLKYSLQRHIRTHTGEKPFKCNQCEKAFSHHCNLQTHRRTHTREKPFKCNECDKAFSQF 229

  Fly   150 SSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRT 214
            .:|:.|...||||:||||.:|..:|:.|..||.|:..|:.|:|::|..|:|||.:...|..|:|.
Mouse   230 GNLQNHRRTHTGEKPFKCNECDKAFSEKGSLQKHISIHTGEKPYKCNQCDKAFSHKQSLLIHIRI 294

  Fly   215 HQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKC 278
            |...:|:||:.|.|:|..:.||:.|:..|: |:.:||..|.|.|.::..||.|:|.|.||.|::|
Mouse   295 HTGEKPYKCNQCDKAFSHKHILKNHIRIHSGEKPYKCNLCDKVFSRHFHLQNHIRTHTGEKPYRC 359

  Fly   279 PHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFK 343
            ..|.:.|:.:..||.|...|.|::|.||::|...|:.:...:.|:|.||.|:.|||.:|.|:|..
Mouse   360 NQCDKAFSHHKTLQTHRKTHTGEKPFKCNECDKAFSEKGSLQSHIRTHTGEKPYKCNQCDKAFSH 424

  Fly   344 KSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQ 408
            |.:|..|.::||||:|:||..|.|.|..:.:|::|:..|.|||..||:.|.|.|.....|..|.:
Mouse   425 KQNLQIHIRIHTGEKPYKCNQCDKAFSYKQNLQIHIRIHTGEKPYKCNQCDKAFLHQGNLQTHRR 489

  Fly   409 EHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYK 473
            .||....|:|..|.|.::....|..|:||||.|.|:||:.|.|.|::.:..|.|.||||||||:|
Mouse   490 THTRDKPFQCNLCDKVFSRHFHLQNHIRTHTREKPYKCNECGKGFSQHSSLQTHRRTHTGEKPFK 554

  Fly   474 CSHCSTRYTQKSSLGRHLR 492
            |:.|...::.|..|..|:|
Mouse   555 CNQCDKAFSCKHHLQTHIR 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 160/405 (40%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Gm5141NP_001242994.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 136..155 CDD:275368 2/18 (11%)
zf-H2C2_2 148..171 CDD:463886 5/22 (23%)
C2H2 Zn finger 163..183 CDD:275368 9/19 (47%)
COG5048 187..566 CDD:227381 149/378 (39%)
C2H2 Zn finger 191..211 CDD:275368 5/19 (26%)
C2H2 Zn finger 219..239 CDD:275368 7/19 (37%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
C2H2 Zn finger 499..519 CDD:275368 6/19 (32%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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