DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Gm5141

DIOPT Version :9

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001242994.1 Gene:Gm5141 / 380850 MGIID:3779466 Length:581 Species:Mus musculus


Alignment Length:474 Identity:177/474 - (37%)
Similarity:270/474 - (56%) Gaps:16/474 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EELESEI--KIENFCSYGKDLEPVKGVPSKLK-----------TCKSKIAKKRPLRKQTDTFKCT 85
            |::.||:  .||:|..| ..|:..|...:..|           .|.|.:.:...:......:||.
Mouse   101 EKIPSEVIHCIEDFLPY-TSLQVHKRAQTGQKQYEYKQCGKGFACPSLLKRHERIHTVEKPYKCN 164

  Fly    86 QCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKH-EKRPHKCSHCSKTFTQN 149
            ||.|.|:.|.:|:.|:|.|..|:||:|:.|.|:|....:.:.|...| .::|.||:.|.|.|:|.
Mouse   165 QCDKAFSLKYSLQRHIRTHTGEKPFKCNQCEKAFSHHCNLQTHRRTHTREKPFKCNECDKAFSQF 229

  Fly   150 SSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRT 214
            .:|:.|...||||:||||.:|..:|:.|..||.|:..|:.|:|::|..|:|||.:...|..|:|.
Mouse   230 GNLQNHRRTHTGEKPFKCNECDKAFSEKGSLQKHISIHTGEKPYKCNQCDKAFSHKQSLLIHIRI 294

  Fly   215 HQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKC 278
            |...:|:||:.|.|:|..:.||:.|:..|: |:.:||..|.|.|.::..||.|:|.|.||.|::|
Mouse   295 HTGEKPYKCNQCDKAFSHKHILKNHIRIHSGEKPYKCNLCDKVFSRHFHLQNHIRTHTGEKPYRC 359

  Fly   279 PHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFK 343
            ..|.:.|:.:..||.|...|.|::|.||::|...|:.:...:.|:|.||.|:.|||.:|.|:|..
Mouse   360 NQCDKAFSHHKTLQTHRKTHTGEKPFKCNECDKAFSEKGSLQSHIRTHTGEKPYKCNQCDKAFSH 424

  Fly   344 KSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQ 408
            |.:|..|.::||||:|:||..|.|.|..:.:|::|:..|.|||..||:.|.|.|.....|..|.:
Mouse   425 KQNLQIHIRIHTGEKPYKCNQCDKAFSYKQNLQIHIRIHTGEKPYKCNQCDKAFLHQGNLQTHRR 489

  Fly   409 EHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYK 473
            .||....|:|..|.|.::....|..|:||||.|.|:||:.|.|.|::.:..|.|.||||||||:|
Mouse   490 THTRDKPFQCNLCDKVFSRHFHLQNHIRTHTREKPYKCNECGKGFSQHSSLQTHRRTHTGEKPFK 554

  Fly   474 CSHCSTRYTQKSSLGRHLR 492
            |:.|...::.|..|..|:|
Mouse   555 CNQCDKAFSCKHHLQTHIR 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 160/405 (40%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
zf-H2C2_2 179..204 CDD:290200 11/24 (46%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Gm5141NP_001242994.1 KRAB 4..>45 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 136..155 CDD:275368 2/18 (11%)
zf-H2C2_2 148..171 CDD:290200 5/22 (23%)
C2H2 Zn finger 163..183 CDD:275368 9/19 (47%)
zf-H2C2_2 175..200 CDD:290200 11/24 (46%)
COG5048 187..566 CDD:227381 149/378 (39%)
C2H2 Zn finger 191..211 CDD:275368 5/19 (26%)
zf-H2C2_2 203..228 CDD:290200 8/24 (33%)
C2H2 Zn finger 219..239 CDD:275368 7/19 (37%)
zf-H2C2_2 231..255 CDD:290200 11/23 (48%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 259..284 CDD:290200 11/24 (46%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
zf-H2C2_2 287..312 CDD:290200 10/24 (42%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
zf-H2C2_2 316..340 CDD:290200 9/23 (39%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
zf-H2C2_2 343..368 CDD:290200 11/24 (46%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
zf-H2C2_2 372..395 CDD:290200 9/22 (41%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
zf-H2C2_2 399..424 CDD:290200 11/24 (46%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 427..452 CDD:290200 12/24 (50%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..480 CDD:290200 11/24 (46%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
C2H2 Zn finger 499..519 CDD:275368 6/19 (32%)
zf-H2C2_2 511..536 CDD:290200 13/24 (54%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
zf-H2C2_2 539..564 CDD:290200 13/24 (54%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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