DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and cg

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:509 Identity:136/509 - (26%)
Similarity:191/509 - (37%) Gaps:124/509 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE 133
            |.|:||       :.|.:|.|:|..|.:|.:|.|:|..|||..|:||.|||..:.....|||.|.
  Fly   286 IKKERP-------YSCDECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHS 343

  Fly   134 -KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTH 197
             :||::|..|.|:||....|..|...|:.||||.|.:|..:|..|.||..|.:.|:.|||:.|..
  Fly   344 TERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEE 408

  Fly   198 CEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHAERSFKCTQCPKTFLQNDS 262
            |.::|...:||..|.|.|....||.|:.|..||..:..|..|...|.:....||.|.|.|||..:
  Fly   409 CGESFAQENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRT 473

  Fly   263 LQIHL-RVHAGEDPFKCPHCSETFARNSRLQLHL-LEHAGKEPLKCSQCSAT-FAMRSLYRVH-- 322
            |..|: |||.||....|..|.|.|...:.|..|: ..|.|..|   :..||| .|.:.|.:.|  
  Fly   474 LVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNP---NTSSATIIANQQLQQAHHH 535

  Fly   323 ----------------------VRLHTRER------QYKCAECSKSFFKKSHLVEHQQVHTGERP 359
                                  :.:.|.:.      |:.|.||..:|..:..|..|.::|||::.
  Fly   536 QAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKS 600

  Fly   360 FKCTHCFKDFKCRTH------------------------LRVHMLDHIGEKVPKCSYCSKEFKLS 400
            .....|........|                        :.|.::...|:.:.:.:.........
  Fly   601 LMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTH 665

  Fly   401 SQLLV-------------HLQEHTGKNQFE-------------------------CPHCSKSYTT 427
            .|.:|             ||| |..:.|.:                         |..|.|.:..
  Fly   666 PQAVVTAVPTMPVHGQQQHLQ-HVAQQQQQQQQQQQQQQQHVVSVAPANKPKSHFCASCGKGFAA 729

  Fly   428 SSTLHMH----------LRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKP 471
            ...|..|          :|||..|       |.|.|.:......|.|.|...||
  Fly   730 KHGLMQHNRRHPNGGCTVRTHVCE-------CGKAFFQKNHLMLHQRQHLETKP 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 133/504 (26%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 9/19 (47%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 10/20 (50%)
C2H2 Zn finger 278..298 CDD:275368 6/20 (30%)
C2H2 Zn finger 306..326 CDD:275368 6/44 (14%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 3/43 (7%)
C2H2 Zn finger 390..410 CDD:275368 5/32 (16%)
C2H2 Zn finger 418..438 CDD:275368 6/29 (21%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
C2H2 Zn finger 474..492 CDD:275368
cgNP_001097306.2 COG5048 287..>371 CDD:227381 34/90 (38%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
zf-H2C2_2 306..331 CDD:463886 13/24 (54%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..482 CDD:275368 10/20 (50%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 720..740 CDD:275368 5/19 (26%)
C2H2 Zn finger 752..771 CDD:275368 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.