DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zkscan7

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_017451263.1 Gene:Zkscan7 / 363170 RGDID:1305242 Length:833 Species:Rattus norvegicus


Alignment Length:463 Identity:158/463 - (34%)
Similarity:239/463 - (51%) Gaps:36/463 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EPPQEDTFEEELIFIS---NSDFEELESEI--KIENFCSYGKDLEPVKGVPSKLKTCKSKIAKKR 73
            ||...|..|:.|..:.   :.:..||||:.  |.:...|....:|..|.|..:.::..|....:|
  Rat   394 EPESGDICEDPLAQVEGCPSDEGSELESDFLEKNDEKNSTKDRIEDSKDVRERPESPSSPAEHQR 458

  Fly    74 PLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHEKRPHK 138
            ..::| ::::|.:|.|.|.|..:|..|.|:|..|||.|                           
  Rat   459 EAKRQ-NSYQCDECGKIFNRSSHLLGHRRIHTGERPSE--------------------------- 495

  Fly   139 CSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFK 203
            |:.|.|||.|.|.|..||..||.|:|::|.:...::...|.|..|.|.|:.|:|::...|.||..
  Rat   496 CNECGKTFLQTSQLIVHLRTHTQEKPYECQESGKTYCHSSRLIQHQRLHNGEKPYKGNECVKASI 560

  Fly   204 NNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHAERSFKCTQCPKTFLQNDSLQIHLR 268
            .:|.|.:|...|...:|   :...::|.....||..:|..:::.::|.:|.|.|..|.:|..|.|
  Rat   561 QSSQLIDHKGAHAAEKP---NESEEAFIWSKSLQHQVLHTSKKPYECNECGKAFCSNRNLTDHQR 622

  Fly   269 VHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYK 333
            :|.||.|::|..|.:.|:|:..|..|...|.|::|.|||:|...|:..|....|.|:||.|:.::
  Rat   623 IHTGEKPYECIECGKAFSRSKCLTRHQSLHTGEKPYKCSECGKAFSQNSQLIDHERIHTGEKPFE 687

  Fly   334 CAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFK 398
            |:||.|.|.....|:.||::||||:|:||:.|.|.|...:||.:|...|.|||...|:.|.|.|.
  Rat   688 CSECGKKFSLSKCLIRHQRLHTGEKPYKCSECGKSFNQNSHLIIHQRIHTGEKPYGCNECGKVFS 752

  Fly   399 LSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHL 463
            .||.|:||.:.|||:..::|..|.||:..||.|.:|.|.||||.|::|..|.|.|::.:....|.
  Rat   753 YSSSLMVHQRTHTGEKPYKCKDCMKSFGDSSQLIVHQRVHTGEKPYECIECGKAFSQRSTFNHHQ 817

  Fly   464 RTHTGEKP 471
            |||..|||
  Rat   818 RTHNVEKP 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 142/398 (36%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 0/19 (0%)
C2H2 Zn finger 139..159 CDD:275368 10/19 (53%)
C2H2 Zn finger 167..187 CDD:275368 5/19 (26%)
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368
Zkscan7XP_017451263.1 SCAN 212..322 CDD:128708
COG5048 463..817 CDD:227381 135/384 (35%)
C2H2 Zn finger 468..488 CDD:275368 8/19 (42%)
C2H2 Zn finger 496..516 CDD:275368 10/19 (53%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
C2H2 Zn finger 552..572 CDD:275370 6/19 (32%)
C2H2 Zn finger 604..624 CDD:275368 8/19 (42%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 7/19 (37%)
C2H2 Zn finger 688..708 CDD:275368 8/19 (42%)
C2H2 Zn finger 716..736 CDD:275368 7/19 (37%)
C2H2 Zn finger 744..764 CDD:275368 9/19 (47%)
C2H2 Zn finger 772..792 CDD:275368 9/19 (47%)
C2H2 Zn finger 800..820 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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