DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Paris

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:285 Identity:109/285 - (38%)
Similarity:160/285 - (56%) Gaps:25/285 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QEDTFEEEL-IFISNSDFEELESE-IKIENFCSYGKDLEPVKGVPSKLKTCKSKIAKKRPLRKQT 79
            :::..|:.| ..:...|:|..|.| .:|::..:...|     |     |:...|:|         
  Fly    80 RDEGIEDALCALLEEEDWEISEDEDARIDSASAADDD-----G-----KSDSKKVA--------- 125

  Fly    80 DTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRPHKCSHCS 143
              |:|.:|.|.:.||.....|:|.|.:.:.|.|.:|.::|..|...|.|:..|. .:|::||||:
  Fly   126 --FECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCA 188

  Fly   144 KTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHL 208
            |||.|.|:|:.|...|||||||||:|||.:|.:.|.|:.|:|||..||||:|:.|.|.|....||
  Fly   189 KTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHL 253

  Fly   209 QEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAG 272
            ..|.|:|...||||||||.|:|.::..|::|...| .:|.|:|:.|||||..:.:|:.|..||..
  Fly   254 DNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNA 318

  Fly   273 EDPFKCPHCSETFARNSRLQLHLLE 297
            |..||||||:..:.:...|..|:||
  Fly   319 ERTFKCPHCASFYKQRKTLARHILE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 97/226 (43%)
C2H2 Zn finger 84..104 CDD:275368 7/19 (37%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 11/19 (58%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 8/20 (40%)
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 77/160 (48%)
C2H2 Zn finger 184..204 CDD:275368 11/19 (58%)
C2H2 Zn finger 212..232 CDD:275368 9/19 (47%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.