DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and CG44002

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:283 Identity:97/283 - (34%)
Similarity:144/283 - (50%) Gaps:52/283 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKDEPPQEDTFEEELIFISNSD----FEELESEIKI-ENFCSYGKDLEPVKGVPSKLKTC-KSKI 69
            |:|...:|:..|:.:|.:|:||    .:|.|.::.: ||           |...:::.|. :||.
  Fly    79 VQDTVLEEELSEDVIIELSDSDEVILIDEQEEKVHLSEN-----------KAPTNEVSTQEESKT 132

  Fly    70 AKKRPLRKQTDTFK------CTQCQKTFTRKENLESH-LRLHAEERPFECSHCSKSFGRRTHYKR 127
            |       |:|...      ||||..:|.|...||.| ||.|..:.|...|..|:          
  Fly   133 A-------QSDNVSEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSE---------- 180

  Fly   128 HLLKHEKR----------PHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQV 182
            |.:|.|.|          .|.|..|:|||...:|..:|...||||:||.|..|...||..:.::.
  Fly   181 HAVKEELRTKARQLSRNSTHTCRLCNKTFCSKASCVRHQKTHTGEKPFACEICQKPFADLASVKR 245

  Fly   183 HLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AER 246
            |||||:.||||:|..|:.||.:.|.|::|:|.|...||:||..|.|.|:.||..:||:::| ||:
  Fly   246 HLRTHTGERPFKCLTCQSAFSDGSALRQHIRIHTGERPYKCDMCDKFFRERSDARKHMMSHTAEK 310

  Fly   247 SFKCTQCPKTFLQNDSLQIHLRV 269
            .|||:||.:.|.|...|:.|:::
  Fly   311 RFKCSQCERRFRQPKGLRRHVKL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 80/214 (37%)
C2H2 Zn finger 84..104 CDD:275368 11/20 (55%)
C2H2 Zn finger 112..132 CDD:275368 3/19 (16%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/20 (35%)
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
CG44002NP_608754.1 zf-AD 4..74 CDD:462262
C2H2 Zn finger 146..166 CDD:275368 10/19 (53%)
COG5048 <162..302 CDD:227381 56/149 (38%)
C2H2 Zn finger 202..222 CDD:275368 7/19 (37%)
C2H2 Zn finger 230..250 CDD:275368 7/19 (37%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
SUF4-like 282..>342 CDD:411020 23/52 (44%)
C2H2 Zn finger 286..311 CDD:411020 11/24 (46%)
C2H2 Zn finger 286..306 CDD:275368 8/19 (42%)
C2H2 Zn finger 314..335 CDD:411020 7/20 (35%)
C2H2 Zn finger 314..333 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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