DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp236

DIOPT Version :9

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001361158.1 Gene:Zfp236 / 329002 MGIID:1926950 Length:1847 Species:Mus musculus


Alignment Length:835 Identity:180/835 - (21%)
Similarity:270/835 - (32%) Gaps:344/835 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLANVDQRPVKDEPPQEDTFEEELI-----FISNSDFEELESEIKIENFCS--YGKDLEPVKGV- 58
            |..:.:|...::.|.:.|..|::|:     |:..|..||......:..:|:  :.|..:.|:.: 
Mouse   440 DPMDAEQEKGQESPEKTDKKEKKLLKKKSPFLPGSIREENGVRWHVCPYCTKEFRKPSDLVRHIR 504

  Fly    59 ------PSKLKTCKSKIAKKRPLRKQTDT------FKCTQCQKTFTRKENLESHLRLHAEERPFE 111
                  |.|...|....|.|..|.....|      |||..|.|:|:...:|:.|:|||...|||.
Mouse   505 IHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFA 569

  Fly   112 CSHCSKSFGRRTHYKRHLLKHEK------------------------------------------ 134
            |.||.|.|....|.|.|:..|.|                                          
Mouse   570 CPHCDKKFRTSGHRKTHVASHFKHTELRKLRQQRKPVKGRVGKSSVPVPDIPLQEPILITDLGLI 634

  Fly   135 ----------------------RPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARK 177
                                  ||:||.:|.:.:.::..||||:..||||:||||:||...|...
Mouse   635 QPIPKNQFFQNYFNNSFGNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSA 699

  Fly   178 SHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLT 242
            ..|:.|:|||:..:.|:|..|..||.....|:.|:..|.:.||:.|.:|.|:||.....:||:.|
Mouse   700 GVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKT 764

  Fly   243 HA--------------------------------------------------------------- 244
            |.                                                               
Mouse   765 HRYELAQQLQQHQEASSMDDDSTVDQQSMHVAAPMPVEIESAELQQTPETVAADPESILELGPQH 829

  Fly   245 ---------------------ERSFKCTQCP---------------------------------- 254
                                 |..|..:|.|                                  
Mouse   830 VVGTEDAALGQQLADQPLEADEDGFTASQAPLPGHMDQFEEQGTPQPSFESAGLPQGFTVTDTYS 894

  Fly   255 -----------------------KTFLQNDSLQIH-----------LRVHAGED----------- 274
                                   .:|.|.:.||:.           |...:.||           
Mouse   895 QQTSFPPVQQLQDSSTLESQALSTSFHQQNLLQVPNSDAINVATRLLPESSQEDLDLQTQGPQFL 959

  Fly   275 ---------PFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRER 330
                     .::|.:|::.|.::|.|:.|:..|.|::|.||..|...|....:.:.|.:.||..:
Mouse   960 EDSEDQSRRSYRCDYCNKGFKKSSHLKQHVRSHTGEKPYKCKLCGRAFVSSGVLKSHEKTHTGVK 1024

  Fly   331 QYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDH------------- 382
            .:.|:.|:.||.....|..|...|...:|:||..|.:.|:...|.|.||..|             
Mouse  1025 AFSCSICNASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTAVHCRKHMKRHQAVSSAAAAAAET 1089

  Fly   383 -----------------------------------------------IGEKV------------- 387
                                                           :.|||             
Mouse  1090 EGGDTCVEEDEENSDRSASRKPRPEVITFTEEETAQLAKIQPQESATVSEKVLVQSAAEKDRISE 1154

  Fly   388 -----------PK----CSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRT 437
                       ||    |:||.|.||..|.|:.|::.|||:..::|..|.||:|..|||..|::|
Mouse  1155 MKDKQAELEAEPKHANCCTYCPKSFKKPSDLVRHVRIHTGEKPYKCDECGKSFTVKSTLDCHVKT 1219

  Fly   438 HTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            |||:..|.|..||..|:.....:.|:|.|||.||:||.||..|:........|::
Mouse  1220 HTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQ 1274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 159/733 (22%)
C2H2 Zn finger 84..104 CDD:275368 7/19 (37%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
zf-H2C2_2 179..204 CDD:290200 10/24 (42%)
C2H2 Zn finger 195..215 CDD:275368 6/19 (32%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 7/87 (8%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 4/19 (21%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Zfp236NP_001361158.1 COG5048 <30..234 CDD:227381
C2H2 Zn finger 41..61 CDD:275368
C2H2 Zn finger 70..90 CDD:275368
C2H2 Zn finger 97..117 CDD:275368
C2H2 Zn finger 125..145 CDD:275368
C2H2 Zn finger 157..177 CDD:275368
COG5048 197..>550 CDD:227381 25/109 (23%)
C2H2 Zn finger 201..221 CDD:275368
C2H2 Zn finger 229..249 CDD:275368
C2H2 Zn finger 257..278 CDD:275368
C2H2 Zn finger 289..310 CDD:275368
C2H2 Zn finger 486..506 CDD:275368 3/19 (16%)
C2H2 Zn finger 514..534 CDD:275368 4/19 (21%)
C2H2 Zn finger 542..562 CDD:275368 7/19 (37%)
zf-H2C2_2 554..579 CDD:372612 13/24 (54%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
COG5048 653..1058 CDD:227381 81/404 (20%)
C2H2 Zn finger 661..681 CDD:275368 6/19 (32%)
C2H2 Zn finger 689..709 CDD:275368 7/19 (37%)
C2H2 Zn finger 717..737 CDD:275368 6/19 (32%)
C2H2 Zn finger 745..765 CDD:275368 7/19 (37%)
COG5048 937..1317 CDD:227381 84/338 (25%)
C2H2 Zn finger 972..992 CDD:275368 6/19 (32%)
C2H2 Zn finger 1000..1020 CDD:275368 4/19 (21%)
C2H2 Zn finger 1028..1048 CDD:275368 6/19 (32%)
C2H2 Zn finger 1172..1192 CDD:275368 9/19 (47%)
C2H2 Zn finger 1200..1220 CDD:275368 9/19 (47%)
C2H2 Zn finger 1228..1248 CDD:275368 6/19 (32%)
C2H2 Zn finger 1256..1276 CDD:275370 5/19 (26%)
Herpes_BLLF1 <1374..1675 CDD:282904
C2H2 Zn finger 1662..1683 CDD:275368
C2H2 Zn finger 1691..1711 CDD:275368
C2H2 Zn finger 1727..1747 CDD:275368
zf-H2C2_2 1740..1764 CDD:372612
C2H2 Zn finger 1755..1775 CDD:275368
zf-H2C2_2 1767..1792 CDD:372612
C2H2 Zn finger 1783..1801 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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