DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and CG10959

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:369 Identity:99/369 - (26%)
Similarity:157/369 - (42%) Gaps:75/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LANVDQ--RPVKDEPPQEDTFEEELIFISNSDF----EELESEIKIEN----------------- 44
            ||..:|  :.|..||...|:|::|  ::.|.|.    |:.|.|:.:|.                 
  Fly    79 LAREEQEFQGVSAEPLAVDSFKKE--YLPNEDVLSEEEDAEQELGLEQDEGNPLRIMVLGGKQSV 141

  Fly    45 ------------------FCSYGKDLEPVKGV-------PSKLKTCKSKIAKKRPLRKQTDTFKC 84
                              ..:.|..||.:.||       |.:.......:.||   ::|...:.|
  Fly   142 DEETIDTMWQPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKK---QRQPKDYNC 203

  Fly    85 TQCQKTFTRKENLESHLRL-HAEERPFECSHCSKSFGRRTHYKRHLLKHEKRPH---KCSHCSKT 145
            ..|.:.:|.::.|.:||:: |...:.|:|..|..:|    ...|.|.:|.::.|   .|..|.|.
  Fly   204 PHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATF----DVDRALAQHRRKEHTEFACQLCDKV 264

  Fly   146 FTQNSSLKQHLHEHTGERPFKC--TQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHL 208
            |..:.||.:|:..|:|.|.|||  ..|..||..:.:|..|.|.|||||.:.|..|....:....|
  Fly   265 FKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREAL 329

  Fly   209 QEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFLQNDSLQIHLRVHAG 272
            ..|.|||...:||:|..|::.|..:|:|.:|...|: |:.:||.:|...|.:..:|..|..:|.|
  Fly   330 IVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLG 394

  Fly   273 EDPFKCPHCSETFARNSRLQLHLLEH-----------AGKEPLK 305
            ...|||..|...:|:.:.|..|:..|           |..||::
  Fly   395 IKKFKCKICGNAYAQAAGLSAHMRAHKLQASVNATEGAEAEPIE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 76/250 (30%)
C2H2 Zn finger 84..104 CDD:275368 6/20 (30%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/21 (33%)
C2H2 Zn finger 195..215 CDD:275368 5/19 (26%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 5/19 (26%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..326 CDD:275368 99/369 (27%)
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/24 (25%)
COG5048 <258..416 CDD:227381 55/157 (35%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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