DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp472

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_877975.1 Gene:Zfp472 / 314587 RGDID:727944 Length:533 Species:Rattus norvegicus


Alignment Length:505 Identity:156/505 - (30%)
Similarity:222/505 - (43%) Gaps:67/505 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EEELIFISNSDFEELESEIK---IENFCSY------------GKDLEPVKGVPSKLKTCKSKI-- 69
            |||    .|.:::..:..::   :|..|.|            ..|....:.:|..:..|:..|  
  Rat    53 EEE----DNEEYQNPKGSLRTLMVERLCKYHHGNQYGETQRQSPDHVVSEKMPPAVSECERDILI 113

  Fly    70 -----------AKKRPLRKQTD---TFKCTQCQKTFTRKENLESHLRLHAEERPF---ECSHCSK 117
                       ..::|.:.|..   |.|..:|.|.|:..|.|..|.....:::|.   |.:..|:
  Rat   114 HLPSDMHFKGQTGEKPCQYQEQMEKTLKHKKCWKDFSYSELLWMHKNPPMKQKPHENKEANEASR 178

  Fly   118 SFGRRTHYKRHLLKHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQV 182
            ||.....|:....  |::.:.|..|.|.::.:.||..|...|..|:...|.||..:|:|.|.|..
  Rat   179 SFTSDHDYEGTFT--EEKSYICKQCGKAWSDSCSLLWHERSHIQEKRHTCKQCGKAFSRPSQLHK 241

  Fly   183 HLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHAERS 247
            |.|.|:.|:|:.||||.|||.:......|.|||...:||.|.                       
  Rat   242 HERIHTGEKPYVCTHCGKAFIDRRTCHNHERTHTGVKPFACK----------------------- 283

  Fly   248 FKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSAT 312
                ||.|.||::..|.||.|:|.||.||.|.||.:.|..:|....|...|.|::|..|.||...
  Rat   284 ----QCGKAFLRSCQLLIHERIHTGERPFVCKHCGKAFTYSSACYYHERIHTGEKPCVCKQCGKA 344

  Fly   313 FAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRV 377
            |...:...:|.|.|:.|:.|.|..|.|:|...:...:|:::||||:|:.|..|.|.|.....|.:
  Rat   345 FKCSAYLHIHERSHSGEKPYVCKHCGKAFAYATGCHKHERIHTGEKPYMCVQCGKLFTFPRSLHI 409

  Fly   378 HMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGEL 442
            |...|.|||...|..|.|.|...:.|..|.:.|||:..:.|..|.|::......:.|.||||||.
  Rat   410 HERSHSGEKPYVCKQCGKSFTQGTSLRRHERIHTGEKPYVCRQCGKAFIQRDDCYSHERTHTGEK 474

  Fly   443 PFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            ||.|..|.|.|..|...|.|.:.|||||||.|..|...:|..:.|.||.|
  Rat   475 PFMCVQCGKTFTFSKSLQIHEKNHTGEKPYICKQCGKAFTCSTYLLRHER 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 139/409 (34%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 1/19 (5%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 5/19 (26%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 6/17 (35%)
Zfp472NP_877975.1 KRAB 9..50 CDD:460171
COG5048 194..>491 CDD:227381 112/323 (35%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
C2H2 Zn finger 226..246 CDD:275368 9/19 (47%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
C2H2 Zn finger 282..302 CDD:275368 10/46 (22%)
C2H2 Zn finger 310..330 CDD:275368 6/19 (32%)
C2H2 Zn finger 338..358 CDD:275368 6/19 (32%)
C2H2 Zn finger 366..386 CDD:275368 5/19 (26%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..442 CDD:275368 6/19 (32%)
C2H2 Zn finger 450..470 CDD:275368 5/19 (26%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..526 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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