DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and sfc2

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_594670.1 Gene:sfc2 / 2542887 PomBaseID:SPAC144.09C Length:374 Species:Schizosaccharomyces pombe


Alignment Length:363 Identity:113/363 - (31%)
Similarity:163/363 - (44%) Gaps:59/363 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 LKHEKRPHKCSH--CSKTFTQNSSLKQHLHEHTGERPFKC--TQCSTSFARKSHLQVHLRTHSEE 190
            |:..|:...|.:  |.|.:::.|.|:|||..|:.||||.|  |.||.:|.|||||::|.|.|:..
pombe    16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNV 80

  Fly   191 RPFECTH--CEKAFKNNSHLQEHLRTHQEARPFKCS--HCSKSFKLRSILQKHLL---THAERSF 248
            :||.|.:  |:..|....||:.|:..|::.:|:.|:  .|.:.|.....|:.|:.   ||. ..:
pombe    81 KPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHL-LPY 144

  Fly   249 KCT--QCPKTFLQNDSLQIHL-RVHAGEDPFKCPHCS----ETFARNSRLQLHLLE-HAGKEPLK 305
            .||  .|...|.....||.|: |.|.....:.|||.|    |.|.:.|:||.|:.| |..    .
pombe   145 PCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP----S 205

  Fly   306 CSQCSATFAMRSLYRVHVRLH---TRERQ-YKC--AECSKSFFKKSHLVEH-QQVHTGERPFKCT 363
            ||.|...|...:..|.||.||   ..||: |.|  ..|.|||.:.|.|.:| ..:|.|...|.|.
pombe   206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCD 270

  Fly   364 HCFKDFKCRTHLRVHMLDHIGEKV--PKCSYC--------------SKEFKLSSQLLVH-----L 407
            .|...|..:..|:.|:.....:|.  |..:.|              .||.:|||.|:..     :
pombe   271 SCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVAIHDQKEKELSSNLVSDVAKKII 335

  Fly   408 QEHTG-----KNQFEC--PHCSKSYTTSSTLHMHLRTH 438
            .|.||     ..::.|  |.|:..:.....:|.||.:|
pombe   336 NEVTGHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 113/363 (31%)
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368 1/1 (100%)
C2H2 Zn finger 139..159 CDD:275368 8/21 (38%)
C2H2 Zn finger 167..187 CDD:275368 12/21 (57%)
C2H2 Zn finger 195..215 CDD:275368 6/21 (29%)
C2H2 Zn finger 223..243 CDD:275368 5/24 (21%)
C2H2 Zn finger 250..270 CDD:275368 8/22 (36%)
C2H2 Zn finger 278..298 CDD:275368 11/24 (46%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 8/22 (36%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 390..410 CDD:275368 7/38 (18%)
C2H2 Zn finger 418..438 CDD:275368 6/21 (29%)
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
sfc2NP_594670.1 COG5048 1..374 CDD:227381 113/363 (31%)
C2H2 Zn finger 28..47 CDD:275368 7/18 (39%)
C2H2 Zn finger 55..77 CDD:275368 12/21 (57%)
C2H2 Zn finger 85..107 CDD:275368 6/21 (29%)
C2H2 Zn finger 115..138 CDD:275368 5/22 (23%)
C2H2 Zn finger 146..165 CDD:275368 6/18 (33%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
C2H2 Zn finger 238..261 CDD:275368 8/22 (36%)
C2H2 Zn finger 269..286 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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