DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Zfp12

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001276518.1 Gene:Zfp12 / 231866 MGIID:99157 Length:686 Species:Mus musculus


Alignment Length:500 Identity:182/500 - (36%)
Similarity:270/500 - (54%) Gaps:29/500 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DQRPVKDEPP-QEDTFEEELIFISNSDFEELESEIKI-----------ENFCSYGKDLEPVKGVP 59
            |:.|:.:|.. |:..|.||       .||.:|.:...           |..|.: .|.|......
Mouse   191 DEDPLGEEGVYQKGHFLEE-------PFEYVECQKSFPKGTVFLNHLEEEPCDW-NDAEVAFLQT 247

  Fly    60 SKLKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTH 124
            |.|...:..:.:.:|       ::|.||.|:|.:|.....|.|.|..|:||:||.|.|||.::..
Mouse   248 SDLSAHQDSLMEMKP-------YECQQCGKSFCKKSKFVIHQRTHTGEKPFKCSQCGKSFCQKGT 305

  Fly   125 YKRHLLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHS 188
            ...|...|. ::|::|:.|.|||.|...|.||...|:||:|:||..|..||.:|:||..|.||||
Mouse   306 LTVHQRTHTGEKPYECTECGKTFYQKLHLIQHQRTHSGEKPYKCGYCGKSFCQKTHLTQHQRTHS 370

  Fly   189 EERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQ 252
            .|||:.|..|.|.|...|.|.:|.:.|...:.:|||.|.|.|..:|.|..|:.|| .|:.::|.:
Mouse   371 GERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHMRTHTGEKPYECNE 435

  Fly   253 CPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRS 317
            |.|.|.:...|.:|.|.|:||.|::|..|.::|..||.|..|...|.|::|.:|::|...|:..|
Mouse   436 CGKFFSRLSYLTVHYRTHSGEKPYECAECGKSFYLNSALMRHQRVHTGEKPYECNECGKLFSQLS 500

  Fly   318 LYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDH 382
            ...||.|.|:..:.|:|:||.|:|::.|.|..|:::|.||:|::|..|.|.|...::|.:|...|
Mouse   501 YLTVHHRTHSGVKPYECSECGKTFYQNSALCRHRRIHRGEKPYECYICGKFFSQMSYLTIHHRIH 565

  Fly   383 IGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCS 447
            .|||..:|..|.|.|..:|.|..|.:.|||:..:||..|.|.::..|.|.:|.|.|:||.||:|:
Mouse   566 SGEKPYECRECGKSFCQNSALNRHQRTHTGEKAYECYECGKCFSQMSYLTIHHRIHSGEKPFECN 630

  Fly   448 HCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            .|.|.|:|.:....|.|||:|||||:|:.|..::..||:...|.|
Mouse   631 ECGKAFSRMSYLTVHHRTHSGEKPYECTECGKKFYHKSAFNSHQR 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 161/405 (40%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
C2H2 Zn finger 139..159 CDD:275368 9/19 (47%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Zfp12NP_001276518.1 KRAB 8..68 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..129
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..198 2/6 (33%)
COG5048 251..677 CDD:227381 165/431 (38%)
C2H2 Zn finger 265..285 CDD:275368 8/19 (42%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 321..341 CDD:275368 9/19 (47%)
C2H2 Zn finger 349..369 CDD:275368 9/19 (47%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..453 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 489..509 CDD:275368 7/19 (37%)
C2H2 Zn finger 517..537 CDD:275368 8/19 (42%)
C2H2 Zn finger 545..565 CDD:275368 6/19 (32%)
C2H2 Zn finger 573..593 CDD:275368 7/19 (37%)
C2H2 Zn finger 601..621 CDD:275368 7/19 (37%)
C2H2 Zn finger 629..649 CDD:275368 7/19 (37%)
C2H2 Zn finger 657..677 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.