DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp28

DIOPT Version :9

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_780456.2 Gene:Zfp28 / 22690 MGIID:99175 Length:825 Species:Mus musculus


Alignment Length:496 Identity:172/496 - (34%)
Similarity:257/496 - (51%) Gaps:38/496 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EDTFE--EELIFISNSDFEE--------------LESEIKIENFCSYGKDLEPVKGVPSKLKTCK 66
            |.|||  |:.....|..|.|              |.|..:..:.|..||.......|..:...|.
Mouse   308 ECTFERNEQETVTPNRAFSEGRDGMCIESGRWFHLNSSDERSHNCDSGKSFSSNPVVVKETGICS 372

  Fly    67 SKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLK 131
            .|           ..|:|.:|:||||:..:|..|.|:|..|:|::|:.|.|:|...:.:.||...
Mouse   373 GK-----------KLFQCNECKKTFTQSSSLTVHQRIHTGEKPYKCNQCGKAFSDGSSFARHQRC 426

  Fly   132 HE-KRPHKCSHCSKTFTQNSSLKQH-LHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFE 194
            |. |:|::|..|.|.|.||:||.:| .:.||||:||.|..|..:|:....|..|.|.|:.|:|:.
Mouse   427 HTGKKPYECPECGKAFIQNTSLVRHWRYYHTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPYT 491

  Fly   195 CTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHA-ERSFKCTQCPKTFL 258
            |..|.|:|:..|.|..|.|.|...:|::|..|.|:|...:.|.:|...|: |:.|||.:|.|.|.
Mouse   492 CEVCHKSFRYGSSLTVHQRIHTGEKPYECEICRKAFSHHASLTQHQRVHSGEKPFKCKECGKAFR 556

  Fly   259 QNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHV 323
            ||..|..|.|:|.||.||:|..|.::|:.:|:|..|...|.|::|.:|..|...|..::....|.
Mouse   557 QNIHLASHWRIHTGEKPFECGECGKSFSISSQLATHQRIHTGEKPYECKVCRKAFTQKAHLAQHQ 621

  Fly   324 RLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDF----KCRTHLRVHMLDHIG 384
            :.||.|:.|:|.||.|:|.:.:||::||:|||||:|:||..|.|.|    .|..|.|:    |.|
Mouse   622 KTHTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCLECGKAFGDNSSCTQHRRL----HTG 682

  Fly   385 EKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHC 449
            ::..:|..|.|.||..|.|:.|.:.|||:..:||..|.|:::...:|.:|.|.|:|:.|::|..|
Mouse   683 QRPYECVECGKTFKTKSSLICHRRCHTGEKPYECSACGKAFSHRQSLSVHQRIHSGKKPYECKEC 747

  Fly   450 SKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRH 490
            .|.|.:.....:|.|.||||:.|........:.|.:....|
Mouse   748 RKTFIQIGHLNQHKRVHTGERTYNYKKGRRAFRQTAHFAHH 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 154/410 (38%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 9/20 (45%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
zf-H2C2_2 179..204 CDD:290200 10/24 (42%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 4/19 (21%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 7/23 (30%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 2/17 (12%)
Zfp28NP_780456.2 C2H2 Zn finger 716..736 CDD:275368 6/19 (32%)
zf-H2C2_2 728..753 CDD:290200 10/24 (42%)
C2H2 Zn finger 744..764 CDD:275368 6/19 (32%)
C2H2 Zn finger 772..792 CDD:275368 2/17 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..65
KRAB 103..163 CDD:214630
KRAB 103..142 CDD:279668
KRAB <243..281 CDD:214630
COG5048 341..763 CDD:227381 156/436 (36%)
C2H2 Zn finger 355..371 CDD:275368 3/15 (20%)
zf-C2H2 377..399 CDD:278523 10/21 (48%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..415 CDD:290200 9/23 (39%)
C2H2 Zn finger 407..427 CDD:275368 6/19 (32%)
zf-H2C2_2 419..444 CDD:290200 9/24 (38%)
C2H2 Zn finger 435..453 CDD:275368 9/17 (53%)
C2H2 Zn finger 464..484 CDD:275368 6/19 (32%)
zf-H2C2_2 477..501 CDD:290200 10/23 (43%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
zf-H2C2_2 504..529 CDD:290200 9/24 (38%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
zf-H2C2_2 532..557 CDD:290200 10/24 (42%)
C2H2 Zn finger 548..568 CDD:275368 9/19 (47%)
zf-H2C2_2 560..584 CDD:290200 10/23 (43%)
C2H2 Zn finger 576..596 CDD:275368 6/19 (32%)
zf-H2C2_2 589..613 CDD:290200 8/23 (35%)
C2H2 Zn finger 604..624 CDD:275368 4/19 (21%)
zf-H2C2_2 616..641 CDD:290200 10/24 (42%)
C2H2 Zn finger 632..652 CDD:275368 9/19 (47%)
zf-H2C2_2 644..667 CDD:290200 14/22 (64%)
C2H2 Zn finger 660..680 CDD:275368 7/23 (30%)
C2H2 Zn finger 688..708 CDD:275368 8/19 (42%)
zf-H2C2_2 700..725 CDD:290200 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100020
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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