DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Giot1

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_598247.1 Gene:Giot1 / 171090 RGDID:620184 Length:654 Species:Rattus norvegicus


Alignment Length:479 Identity:163/479 - (34%)
Similarity:246/479 - (51%) Gaps:45/479 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QEDTFEEEL---IFISNSDFEELESEIKIENFCSYGKDLEPVKGVPSKLKTCKSKIAKKRPLRKQ 78
            :|||:|..|   .|.|:|...:                                     || ..:
  Rat   203 EEDTYEYNLCDKAFRSDSSLHQ-------------------------------------RP-HLE 229

  Fly    79 TDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRPHKCSHC 142
            ...:|..|.:|.|.....|:.| |.|..|:|::|:.|.|:|..|.:.|.|...|. ::|:.|:.|
  Rat   230 VAPYKYYQYEKDFAHHSCLQEH-RTHTGEKPYKCNQCGKAFASRHNLKMHERIHTGEKPYTCNQC 293

  Fly   143 SKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSH 207
            .|.||..::|::|...||||:|::|:||..:|||::.||||.|.|:.|:|:||:.|.|||.:.|:
  Rat   294 GKAFTLYTNLRKHEKIHTGEKPYECSQCGKAFARRNELQVHERIHTGEKPYECSQCGKAFASRSN 358

  Fly   208 LQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHA 271
            ||.|.|||...:|:.|:.|.|:|..|.:||.|...| .|:.:.|.||.|.|....||..|.::|.
  Rat   359 LQTHERTHTGEKPYLCNQCGKAFAWRRLLQIHERIHTGEKPYACNQCGKAFTHFPSLHNHKKIHT 423

  Fly   272 GEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAE 336
            ||.|:.|..|.:.||..:....|...|.|::|..|.||...|:.||..::|...|..|:.::|.:
  Rat   424 GEKPYTCNECGKAFAHLTSFHNHKKIHTGEKPYGCKQCGKAFSFRSNLQIHETAHKGEKPHECNQ 488

  Fly   337 CSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSS 401
            |.|:|....:|..|::.| |::|::|..|.|.|.....|:.|:..|.|||..:|:.|.|.|...:
  Rat   489 CGKAFAHIVYLQRHERSH-GDKPYECNQCGKGFTHFGRLKNHLKSHTGEKPYECNQCGKVFAYRN 552

  Fly   402 QLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTH 466
            .|..|.:.|||:..:.|..|.|::.:...|..|.:.||.|.|:.|:.|.|.||.....|.|.|.|
  Rat   553 NLQKHERTHTGEKPYVCDQCGKAFASRCNLQKHEKIHTQEKPYVCNQCGKAFASRCNFQVHERIH 617

  Fly   467 TGEKPYKCSHCSTRYTQKSSLGRH 490
            ||||.|..:.|...:..:|:|.:|
  Rat   618 TGEKSYSYNQCGKDFVSQSNLQKH 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 150/405 (37%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 11/19 (58%)
C2H2 Zn finger 195..215 CDD:275368 10/19 (53%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 4/17 (24%)
Giot1NP_598247.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 131..151 CDD:275368
C2H2 Zn finger 159..176 CDD:275368
C2H2 Zn finger 182..201 CDD:275368
COG5048 258..654 CDD:227381 144/385 (37%)
C2H2 Zn finger 262..282 CDD:275368 7/19 (37%)
C2H2 Zn finger 290..310 CDD:275368 7/19 (37%)
C2H2 Zn finger 318..338 CDD:275368 11/19 (58%)
C2H2 Zn finger 346..366 CDD:275368 10/19 (53%)
C2H2 Zn finger 374..394 CDD:275368 8/19 (42%)
C2H2 Zn finger 402..422 CDD:275368 8/19 (42%)
C2H2 Zn finger 430..450 CDD:275368 5/19 (26%)
C2H2 Zn finger 458..478 CDD:275368 7/19 (37%)
C2H2 Zn finger 486..506 CDD:275368 6/19 (32%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 541..561 CDD:275368 6/19 (32%)
C2H2 Zn finger 569..589 CDD:275368 5/19 (26%)
C2H2 Zn finger 597..617 CDD:275368 8/19 (42%)
C2H2 Zn finger 625..645 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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