DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Zfp483

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_596913.1 Gene:Zfp483 / 170955 RGDID:727958 Length:733 Species:Rattus norvegicus


Alignment Length:573 Identity:167/573 - (29%)
Similarity:252/573 - (43%) Gaps:102/573 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PVKDEPPQEDTFEEELIFISNSDFE-------ELESEIKIENFCSYGKDLEPVKGVP-------S 60
            |.:.||.:..|||:..:..:..:::       ||..|:.:||..|    || |.|.|       |
  Rat   167 PPRAEPREAVTFEDVSVDFTRGEWKLLEPSQRELYKEVLLENLGS----LE-VLGSPVSKFDLIS 226

  Fly    61 KLKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHY 125
            .||..|.....::.|.|  |.......:::.:|.| |::.:.....|:..|.......:|.:|.:
  Rat   227 HLKWVKLPRVLEKELSK--DPRPGESVKESESRSE-LDAFMEELTLEKTVEYCFSGGGYGLKTEF 288

  Fly   126 KRHLLKHEK-----RPHKCSHC-------SKTFTQNSSLKQH---------LHEHTGERPF---- 165
            ::.|.|.||     :.|:....       .|...|.|::.:|         .....|::||    
  Rat   289 QKRLGKPEKDHGRRKSHESKEAESGETTSEKNVKQTSAMLKHRKALLTKTSQRSKEGKKPFSFHS 353

  Fly   166 -----------KCTQCS----------TSFARKSHLQVHLRTHSEE---------RPFEC---TH 197
                       |..:||          :...||.|.::.....:|:         |...|   :.
  Rat   354 ALVNRRELSGGKSRKCSDREKDPHRPLSPTERKRHPKIGSLRKTEKCSKCGVDFTRILGCVESSQ 418

  Fly   198 CEKAFKNNSHLQEHLRTHQEA---RPFKCSHCSKSFKL---RSILQKHLLTH------------- 243
            |||. :.|....|.....|||   .|.||..|.|:.:.   ||:..:....|             
  Rat   419 CEKC-RKNLFQDETSSKDQEADTEEPRKCKKCGKALEYGSKRSVCVECRNAHKASPSLKPQGKTD 482

  Fly   244 -AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCS 307
             .::|:||.:|.|.|.:.:....|.|.|..|.|:.|.||...|:.||....|...|.|::|..|.
  Rat   483 RRKKSYKCDECGKRFAEENDFSQHQRTHTREKPYVCKHCGRAFSDNSSFCQHQRIHTGEKPYTCK 547

  Fly   308 QCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCR 372
            :|..:|...|....|.|:||.|:.|||.||.|:|.:.|.|..||::||||:||.|..|...|:..
  Rat   548 ECGKSFTHSSSLSKHQRIHTGEKPYKCKECGKAFRQNSCLTRHQKIHTGEKPFLCKECGLSFRLF 612

  Fly   373 THLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRT 437
            :.:..|...|.|||..||.:|.|.|...|:|..||:.|||...::|..|.|::..||:|::|:||
  Rat   613 SSIMYHQRLHKGEKPYKCPHCEKGFPSHSRLSRHLRIHTGAKPYKCKECGKTFRQSSSLNLHIRT 677

  Fly   438 HTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRH 490
            ||||.|:||::|...|.||....||::|||..| |.|..|...:..:|:..||
  Rat   678 HTGEKPYKCNYCGAAFTRSTILVEHVKTHTRVK-YDCKKCGKSFKSRSANLRH 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 142/481 (30%)
C2H2 Zn finger 84..104 CDD:275368 3/19 (16%)
C2H2 Zn finger 112..132 CDD:275368 3/19 (16%)
C2H2 Zn finger 139..159 CDD:275368 4/35 (11%)
C2H2 Zn finger 167..187 CDD:275368 5/29 (17%)
C2H2 Zn finger 195..215 CDD:275368 6/22 (27%)
C2H2 Zn finger 223..243 CDD:275368 5/22 (23%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Zfp483NP_596913.1 SCAN 45..133 CDD:460417
KRAB 176..229 CDD:214630 15/57 (26%)
COG5048 <487..730 CDD:227381 99/244 (41%)
C2H2 Zn finger 490..510 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 7/19 (37%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 574..594 CDD:275368 9/19 (47%)
C2H2 Zn finger 602..622 CDD:275368 4/19 (21%)
C2H2 Zn finger 630..650 CDD:275368 8/19 (42%)
C2H2 Zn finger 658..678 CDD:275368 8/19 (42%)
C2H2 Zn finger 686..706 CDD:275368 7/19 (37%)
C2H2 Zn finger 713..730 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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