DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and ZIM3

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_443114.1 Gene:ZIM3 / 114026 HGNCID:16366 Length:472 Species:Homo sapiens


Alignment Length:532 Identity:146/532 - (27%)
Similarity:241/532 - (45%) Gaps:130/532 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TFEEELIFISNSDFEELESE-------IKIENFCS-----YGKDLEP------------------ 54
            |||:..:..:..:::.|..|       :.:||:.:     .|:..:|                  
Human     9 TFEDVTVNFTQGEWQRLNPEQRNLYRDVMLENYSNLVSVGQGETTKPDVILRLEQGKEPWLEEEE 73

  Fly    55 ------------VKGVPSKLKTCKSKIAKKRP-LRKQT-DTFKCTQCQKTFTRK---------EN 96
                        :.|...|.|..|..:|::.| :.|:| .|.|..:|..  ::|         .:
Human    74 VLGSGRAEKNGDIGGQIWKPKDVKESLAREVPSINKETLTTQKGVECDG--SKKILPLGIDDVSS 136

  Fly    97 LESHLRLHAEE----RPFECSHCSKSFGRRTHYKRHLLKHEKRPHKCSHCSKTFTQNSSLKQHLH 157
            |:.:::.::.:    |....::.||..|::.              ||:.|.|.|:..|.|:.||.
Human   137 LQHYVQNNSHDDNGYRKLVGNNPSKFVGQQL--------------KCNACRKLFSSKSRLQSHLR 187

  Fly   158 EHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFK 222
            .|..::||:|..|..:|..|..|..|.:||:||||::|.:|..|:|..|:|.:|.:.|.:.:|::
Human   188 RHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKCENCGNAYKQKSNLFQHQKMHTKEKPYQ 252

  Fly   223 CSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFA 286
            |..|.|:|..:|....|...| |::|::|.:|.|:|.||.:|..|.:||.|:.||:|..|.:.|.
Human   253 CKTCGKAFSWKSSCINHEKIHNAKKSYQCNECEKSFRQNSTLIQHKKVHTGQKPFQCTDCGKAFI 317

  Fly   287 RNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQ 351
            ..|.|..|...|.|::|.|||.|...|:.:|....|.::||.:|.|:|..|..:|.:|.:|::|:
Human   318 YKSDLVKHQRIHTGEKPYKCSICEKAFSQKSNVIDHEKIHTGKRAYECDLCGNTFIQKKNLIQHK 382

  Fly   352 QVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQF 416
            ::||||:|                                                        :
Human   383 KIHTGEKP--------------------------------------------------------Y 391

  Fly   417 ECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRY 481
            ||..|.|::...|.||.|.:||:||..::||.|.|.|.|......|.:||||:|||.||.|...:
Human   392 ECNRCGKAFFQKSNLHSHQKTHSGERTYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAF 456

  Fly   482 TQKSSLGRHLRR 493
            ..:|.|.||.:|
Human   457 ADRSYLVRHQKR 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 126/419 (30%)
C2H2 Zn finger 84..104 CDD:275368 3/28 (11%)
C2H2 Zn finger 112..132 CDD:275368 3/19 (16%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 0/19 (0%)
C2H2 Zn finger 390..410 CDD:275368 0/19 (0%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
ZIM3NP_443114.1 KRAB 8..68 CDD:214630 9/58 (16%)
COG5048 <157..348 CDD:227381 72/204 (35%)
C2H2 Zn finger 169..189 CDD:275368 8/19 (42%)
C2H2 Zn finger 197..217 CDD:275368 6/19 (32%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:463886 7/23 (30%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
COG5048 <304..465 CDD:227381 64/216 (30%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
C2H2 Zn finger 393..413 CDD:275368 7/19 (37%)
C2H2 Zn finger 421..441 CDD:275368 7/19 (37%)
C2H2 Zn finger 449..470 CDD:275368 8/20 (40%)

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