DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and LOC108647923

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_031760194.1 Gene:LOC108647923 / 108647923 XenbaseID:XB-GENE-29090923 Length:499 Species:Xenopus tropicalis


Alignment Length:359 Identity:135/359 - (37%)
Similarity:177/359 - (49%) Gaps:32/359 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 CSHCSKTFTQNSSLKQHL-----HEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHC 198
            |..|.:|||.||.|..||     ....|..||.||:||..|..:.:|.:|.:.|:.|:.|.|..|
 Frog   161 CYKCGETFTVNSHLLAHLCGTKERIPPGAEPFMCTECSQCFTEERNLLIHQKIHTGEKRFSCKEC 225

  Fly   199 EKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTHAERSFKCTQCPKTFLQNDSL 263
            .|::..|:.|..|.|.|...||:.|:.|.|||                 |..||          |
 Frog   226 GKSYSLNTSLNRHKRIHTGERPYLCTECGKSF-----------------FDKTQ----------L 263

  Fly   264 QIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTR 328
            :.|.::|.||.||.|..|.:.|.....||.|...|.|::|..|::|...|:..|....|.|.|..
 Frog   264 RGHQKIHTGEKPFACTECGKCFPVKFELQKHQRNHTGEKPFICTECGKCFSTSSSLCNHKRYHAG 328

  Fly   329 ERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYC 393
            ::.|.|:||.|||:.||||:.||.|||||:||.||.|.|.|..:...|:|...|.||.:..|:.|
 Frog   329 DKPYLCSECGKSFYGKSHLLIHQTVHTGEKPFTCTECGKRFADKGSFRLHQKIHTGENLLTCTEC 393

  Fly   394 SKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAE 458
            .|||........|.:.|||:..|.|..|.|.:...|.|..|.|.||||.||.|:.|.|.|.....
 Frog   394 GKEFAEKRAFQNHQRTHTGEKPFSCTECGKRFNEKSDLKRHRRVHTGEKPFTCTECGKCFTAWNS 458

  Fly   459 HQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLR 492
            .|.|...||||||:.|:.|...::.:|:|..|.|
 Frog   459 LQSHKTIHTGEKPFTCAECGKSFSMRSTLYNHKR 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 130/343 (38%)
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368
C2H2 Zn finger 139..159 CDD:275368 10/24 (42%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 4/19 (21%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 12/19 (63%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
LOC108647923XP_031760194.1 PspC_subgroup_2 <12..142 CDD:468202
C2H2 Zn finger 161..186 CDD:275368 10/24 (42%)
COG5048 190..499 CDD:227381 124/330 (38%)
C2H2 Zn finger 194..214 CDD:275368 7/19 (37%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 10/46 (22%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 12/19 (63%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..494 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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