DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and LOC108182721

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_073804695.1 Gene:LOC108182721 / 108182721 -ID:- Length:429 Species:Danio rerio


Alignment Length:465 Identity:184/465 - (39%)
Similarity:254/465 - (54%) Gaps:60/465 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKDEPPQEDTFEEELIFISNSDFEELESE---IKIENFCSYGKDLEPVKGVPSKLKTCKSKIAKK 72
            ||.|..||.|   :||    .|:||.:.|   :|||:......|     ||   ||.        
Zfish    19 VKQEDLQEQT---DLI----KDYEESKEEEHHVKIEDKTHLETD-----GV---LKV-------- 60

  Fly    73 RPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHEKRPH 137
                :..:.|.||.|.|:...|..|::|:|:|..|:||.|:.|.|||                  
Zfish    61 ----RDKNCFTCTPCDKSLASKSKLKTHMRIHTGEKPFTCTQCGKSF------------------ 103

  Fly   138 KCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAF 202
              ||       :|||.||:..||||:||.||||..||::.|.|..|::.|:.|:|..||||.|:|
Zfish   104 --SH-------SSSLNQHMRIHTGEKPFTCTQCGKSFSKSSSLYKHMKIHTGEKPLTCTHCGKSF 159

  Fly   203 KNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIH 266
            .::|.|..|:|.|...:|..|..|.|||...|.|.||:..| .|:.|.||||.|:|..:..|:.|
Zfish   160 NHSSFLNLHMRIHTGEKPLTCPQCGKSFSKSSSLYKHMKIHTGEKPFTCTQCGKSFYDSSYLKKH 224

  Fly   267 LRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFA-MRSLYRVHVRLHTRER 330
            :|:|.||.||.|..|.::|..:|.|:.|::.|.|::|..|:||..:|: ..|||| |:|:||.|:
Zfish   225 MRIHTGEKPFTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSFSKSSSLYR-HMRIHTGEK 288

  Fly   331 QYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSK 395
            .:.|.:|.|||...|.|.:|..:||||:||.|..|.|.|...::|.:||..|.|||...|:.|.|
Zfish   289 PFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHSSNLNLHMRIHTGEKPFTCTQCGK 353

  Fly   396 EFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQ 460
            .|..||.|..|::.|||..::.|..|..::.|::.|..|.|.|||:.|:|||||||.|.||...:
Zfish   354 SFSTSSHLKQHMKVHTGVREYMCLECETTFITAADLKRHQRIHTGDKPYKCSHCSKRFTRSETLK 418

  Fly   461 EHLRTHTGEK 470
            .|.|.|.|:|
Zfish   419 THERIHAGDK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 164/399 (41%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 10/19 (53%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 10/20 (50%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 11/19 (58%)
C2H2 Zn finger 474..492 CDD:275368
LOC108182721XP_073804695.1 None
Blue background indicates that the domain is not in the aligned region.

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