DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and si:ch211-142b24.6

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_017211059.1 Gene:si:ch211-142b24.6 / 103910622 ZFINID:ZDB-GENE-141212-227 Length:429 Species:Danio rerio


Alignment Length:465 Identity:176/465 - (37%)
Similarity:253/465 - (54%) Gaps:60/465 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKDEPPQEDTFEEELIFISNSDFEELESE---IKIENFCSYGKDLEPVKGVPSKLKTCKSKIAKK 72
            ||.|..||.|   :||    .|:||.:.|   :|||:    ...||....:..:.|:|       
Zfish    19 VKQEDLQEQT---DLI----KDYEESKEEEHHVKIED----KTHLETDGVLKVRDKSC------- 65

  Fly    73 RPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRP 136
                     |.||.|.|:...|..|::|:|:|..|:||.|:.|.|||.:.:|..:|:..|. ::|
Zfish    66 ---------FTCTPCDKSLASKSKLKTHMRIHTGEKPFTCTQCGKSFSQSSHLNKHMRIHTGEKP 121

  Fly   137 HKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKA 201
            ..|:.|.|:|:::|||.:|:..||||:||.||.|..||...|.|.:|:|.|:.|:|..|..|.|:
Zfish   122 FTCTQCGKSFSKSSSLYRHMKIHTGEKPFTCTHCGKSFNHSSFLNLHMRIHTGEKPLTCPQCGKS 186

  Fly   202 FKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQI 265
            |..:|.|..|::.|...:||.|:.|.|||...|.|.||:..| .|:.|.||||.|:|..:.||..
Zfish   187 FSKSSSLYRHMKIHTGEKPFTCTQCGKSFSCSSSLNKHMRIHTGEKPFTCTQCGKSFSLSTSLTQ 251

  Fly   266 HLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRER 330
            |:|:|.||.||.||.|.::|:.:|.|..|:..|.|::|..|:||..:|:..|...:|:|:||||:
Zfish   252 HMRIHTGEKPFTCPQCRKSFSHSSSLHQHMRIHTGEKPFTCTQCGKSFSKSSSLNLHMRIHTREK 316

  Fly   331 QYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSK 395
            .:.|.:|.|||...|||.:|..:|||::||.||.                            |.|
Zfish   317 PFTCPQCGKSFIHSSHLNQHIMIHTGKKPFTCTQ----------------------------CGK 353

  Fly   396 EFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQ 460
            .|..||.|..|::.||...::.|..|.|::.|::.|..|.|.||||.|:|||||||.|.:....:
Zfish   354 SFSQSSYLKNHMKIHTSVKEYVCLECEKTFITAAELKRHQRIHTGEKPYKCSHCSKRFTQLGTLK 418

  Fly   461 EHLRTHTGEK 470
            .|.|.|||:|
Zfish   419 THQRIHTGDK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 157/399 (39%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
C2H2 Zn finger 139..159 CDD:275368 8/19 (42%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 9/19 (47%)
C2H2 Zn finger 250..270 CDD:275368 10/19 (53%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
C2H2 Zn finger 362..382 CDD:275368 2/19 (11%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
C2H2 Zn finger 474..492 CDD:275368
si:ch211-142b24.6XP_017211059.1 C2H2 Zn finger 68..88 CDD:275368 8/19 (42%)
COG5048 92..424 CDD:227381 142/359 (40%)
C2H2 Zn finger 96..116 CDD:275368 7/19 (37%)
C2H2 Zn finger 124..144 CDD:275368 8/19 (42%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 9/19 (47%)
C2H2 Zn finger 348..368 CDD:275368 9/47 (19%)
C2H2 Zn finger 376..396 CDD:275368 7/19 (37%)
C2H2 Zn finger 404..424 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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