DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Gm2007

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001365524.1 Gene:Gm2007 / 102639653 MGIID:3780177 Length:498 Species:Mus musculus


Alignment Length:430 Identity:179/430 - (41%)
Similarity:245/430 - (56%) Gaps:31/430 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 HLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGER 163
            |.|..:.|:|.|...|.|:|...:..:||.:||. ::.|.|:.|.|.|...:.|:.|...||||:
Mouse    65 HERSCSAEQPSEFIQCGKAFAYESGRQRHQIKHNGEKHHDCNQCGKDFRTWNVLQIHKRTHTGEK 129

  Fly   164 PFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSK 228
            |:.|.||...|||..|||:|.|||:.|:.:||..|.||||...:||.|.|||...:|::|:.|.|
Mouse   130 PYDCKQCGKVFARSCHLQIHNRTHAGEKQYECNQCGKAFKRRINLQIHKRTHTGEKPYECNQCGK 194

  Fly   229 SFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQ 292
            :|.....||||..|| .|:.::|.||.|.|.|:..|:||.|.|.||.|::|..|.:.|||:..||
Mouse   195 AFASSGELQKHKRTHTGEKPYECKQCGKAFSQSSHLRIHKRTHTGEKPYECNQCGKAFARSGDLQ 259

  Fly   293 LHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSF--------FKKSH--- 346
            .|...|.|::|.:|.||...||..|....|.|.||.::.|:|.:|.|:|        .|::|   
Mouse   260 KHKRTHTGEKPYECKQCGKAFAHSSHLHKHERTHTGDKPYECKQCGKAFAVIYTLQMHKRTHTGD 324

  Fly   347 -----------------LVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCS 394
                             |..|::.||||:|:||..|.|.|....|||:|...|.|||..:|:.|.
Mouse   325 KPYECKQCGKAFAVIYTLQMHKRTHTGEKPYKCKQCGKAFARSCHLRIHKRTHTGEKPYECNQCG 389

  Fly   395 KEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEH 459
            |.|..||.|.:|.:.|||:..:||..|.|::.|...|.:|.||||||.|::|:.|.|.||||.:.
Mouse   390 KAFAESSTLQIHNRTHTGEKPYECNQCGKAFITRRVLQIHKRTHTGEKPYECNQCGKAFARSCDL 454

  Fly   460 QEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLRRTLCGTK 499
            |:|.|||||||||:|:||...:.|.|||..| :||..|.:
Mouse   455 QKHKRTHTGEKPYECNHCGKAFAQSSSLRIH-KRTYTGER 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 170/407 (42%)
C2H2 Zn finger 84..104 CDD:275368 2/3 (67%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 11/19 (58%)
C2H2 Zn finger 195..215 CDD:275368 10/19 (53%)
C2H2 Zn finger 223..243 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 10/19 (53%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
C2H2 Zn finger 334..354 CDD:275368 8/47 (17%)
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 10/19 (53%)
C2H2 Zn finger 474..492 CDD:275368 8/17 (47%)
Gm2007NP_001365524.1 KRAB 3..44 CDD:460171
COG5048 74..486 CDD:227381 173/412 (42%)
C2H2 Zn finger 79..97 CDD:275368 5/17 (29%)
C2H2 Zn finger 105..125 CDD:275368 6/19 (32%)
C2H2 Zn finger 133..153 CDD:275368 11/19 (58%)
C2H2 Zn finger 161..181 CDD:275368 10/19 (53%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
C2H2 Zn finger 329..349 CDD:275368 2/19 (11%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
C2H2 Zn finger 469..488 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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