DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and 2010315B03Rikl

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_006244276.1 Gene:2010315B03Rikl / 102553278 RGDID:7648507 Length:557 Species:Rattus norvegicus


Alignment Length:420 Identity:168/420 - (40%)
Similarity:249/420 - (59%) Gaps:7/420 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHE-KRPHKCSHCSKT 145
            ::||.....|....:|:.|...:..|:|:||..|.|:|....|.:.|...|. ::|::|..|...
  Rat    75 YECTHYGTGFASHGHLQRHKGTYTGEKPYECKQCGKAFAWNCHLQIHKRTHTGEKPYECDQCGTA 139

  Fly   146 FTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQE 210
            |..:..|::|...||||:|::|.||..:|::.|.||||.|||:.|:|:||..|.||:..:||||.
  Rat   140 FASHGHLQRHKRTHTGEKPYECNQCGKAFSQHSSLQVHKRTHTGEKPYECNQCGKAYARHSHLQR 204

  Fly   211 HLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVHAGED 274
            |.|||...:|::|:.|.|:|...:.||.|..|| .|:|::|.||.|.|:..|.||||.|.|||:.
  Rat   205 HKRTHTGEKPYECNQCGKAFAYHNSLQYHTRTHTGEKSYECKQCGKVFVCRDHLQIHKRTHAGQK 269

  Fly   275 PFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSK 339
            .::|..|.:.||.:|..|.| ..|.|::|.:|:||...||..:..:.|::.||.|:.|||.:|.|
  Rat   270 RYECKQCGKVFAFHSHFQRH-KRHIGEKPYECNQCDKAFASHNNLQKHIKRHTGEKSYKCNQCDK 333

  Fly   340 SFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLL 404
            ::...|||..|:::||||:|:||..|.|.|...:.|:||...|.|||..:|:.|.|.:...|.|.
  Rat   334 TYAHYSHLQTHKRIHTGEKPYKCNQCGKAFSQHSSLQVHKRTHTGEKPYECNQCGKSYARHSHLQ 398

  Fly   405 VHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGE 469
            .|.:.|||:..::|.||.|::...::|..|.|.||.|..:||:.|.|.||..:..|:|:| |||:
  Rat   399 RHKRTHTGEKPYQCNHCGKAFAYYNSLQYHKRAHTREKSYKCNQCDKAFASHSNLQKHIR-HTGD 462

  Fly   470 KPYKCSHCSTRYTQKSSLGRHLRRTLCGTK 499
              |||:.|...:|..|.|.|| :||..|.|
  Rat   463 --YKCNQCVKTFTHHSHLQRH-KRTHTGEK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 158/397 (40%)
C2H2 Zn finger 84..104 CDD:275368 5/19 (26%)
C2H2 Zn finger 112..132 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 5/19 (26%)
C2H2 Zn finger 167..187 CDD:275368 10/19 (53%)
C2H2 Zn finger 195..215 CDD:275368 10/19 (53%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 11/19 (58%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
2010315B03RiklXP_006244276.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 77..97 CDD:275368 5/19 (26%)
C2H2 Zn finger 105..125 CDD:275368 6/19 (32%)
COG5048 129..510 CDD:227381 153/366 (42%)
C2H2 Zn finger 133..153 CDD:275368 5/19 (26%)
C2H2 Zn finger 161..181 CDD:275368 10/19 (53%)
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 11/19 (58%)
C2H2 Zn finger 273..291 CDD:275368 7/18 (39%)
C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
C2H2 Zn finger 328..348 CDD:275368 7/19 (37%)
C2H2 Zn finger 356..376 CDD:275368 7/19 (37%)
C2H2 Zn finger 384..404 CDD:275368 6/19 (32%)
C2H2 Zn finger 412..432 CDD:275368 7/19 (37%)
C2H2 Zn finger 440..458 CDD:275368 7/17 (41%)
C2H2 Zn finger 465..485 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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