DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Zfp648

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001385685.1 Gene:Zfp648 / 100362915 RGDID:2323778 Length:534 Species:Rattus norvegicus


Alignment Length:470 Identity:143/470 - (30%)
Similarity:214/470 - (45%) Gaps:85/470 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LEPVKGVPSKLKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCS 116
            |:...|.||:....|   .:.:|||....:.:        .:|||.:.     |.|.........
  Rat   102 LQEALGAPSRSFLYK---VQMQPLRDSVGSDR--------VKKENKDP-----ASEALTSFLDTG 150

  Fly   117 KSFGRRTHYK---------RHLLKHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGER--------- 163
            .|||.:...:         .|..:.|..|      ::|.:..:.|...|.:..|.|         
  Rat   151 GSFGTQNSLEASSLDKNSLEHFPRFESTP------AQTSSIPAGLAAGLVKAQGSRKAQGQVGPE 209

  Fly   164 --------PFKCTQCSTSFARKSHLQVHLRTHSEER---PFECTHCEKAFKNNSHLQEHLRTHQE 217
                    |.:|.|...:|.:.|.|||    .:|:|   |:.|..|.||:.:.|.||:|.|.|..
  Rat   210 GSRQEEEGPDRCVQGRRAFQKSSELQV----SAEQRGIKPYVCQLCGKAYSHRSTLQQHRRLHTG 270

  Fly   218 ARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLR-VHAGEDPFKCPH 280
            .||::|..|.|::...|..:||:.|| .|:.:.|..|.:.|:::..|:.|.| :|:.:.||.|..
  Rat   271 ERPYRCPFCDKAYTWSSDHRKHIRTHTGEKPYGCPDCGRAFVRSSDLRKHQRNMHSNDKPFPCAQ 335

  Fly   281 CSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKS 345
            |..||.|...|..|...|.|.:|.:||.||..|::.|....|.|:|:.||.:.|:.|.|.|.|.|
  Rat   336 CGLTFNRPLSLLRHQRTHLGAKPFRCSCCSREFSVASRMVEHQRVHSGERPFPCSICGKCFTKSS 400

  Fly   346 HLVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEH 410
            :|.|||.:|||:|||||..                            |...|...|:||.|.:.|
  Rat   401 NLHEHQTLHTGQRPFKCAD----------------------------CGVTFAQPSRLLRHQRIH 437

  Fly   411 TGKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCS 475
            ||:..|.|..|.:::..||||..|.:||:|:..|.|:.|.:.|..::|..:|:|.|.||:||:|.
  Rat   438 TGERPFPCAECGQAFARSSTLKRHQQTHSGDKDFLCAECGRAFRIASELAQHIRMHNGERPYQCE 502

  Fly   476 HCSTRYTQKSSLGRH 490
            .|...:|:.|.|.||
  Rat   503 GCGQTFTRSSHLQRH 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 132/434 (30%)
C2H2 Zn finger 84..104 CDD:275368 3/19 (16%)
C2H2 Zn finger 112..132 CDD:275368 4/28 (14%)
C2H2 Zn finger 139..159 CDD:275368 3/19 (16%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 6/20 (30%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
C2H2 Zn finger 334..354 CDD:275368 10/19 (53%)
C2H2 Zn finger 362..382 CDD:275368 1/19 (5%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
C2H2 Zn finger 474..492 CDD:275368 7/17 (41%)
Zfp648NP_001385685.1 SFP1 <193..292 CDD:227516 30/102 (29%)
C2H2 Zn finger 221..240 CDD:275368 7/22 (32%)
C2H2 Zn finger 248..268 CDD:275368 9/19 (47%)
COG5048 272..>518 CDD:227381 98/274 (36%)
C2H2 Zn finger 276..296 CDD:275368 6/19 (32%)
C2H2 Zn finger 304..322 CDD:275368 5/17 (29%)
C2H2 Zn finger 333..353 CDD:275368 7/19 (37%)
C2H2 Zn finger 361..381 CDD:275368 8/19 (42%)
C2H2 Zn finger 389..409 CDD:275368 10/19 (53%)
C2H2 Zn finger 417..437 CDD:275368 7/47 (15%)
C2H2 Zn finger 445..465 CDD:275368 7/19 (37%)
C2H2 Zn finger 473..493 CDD:275368 6/19 (32%)
C2H2 Zn finger 501..521 CDD:275368 7/17 (41%)

Return to query results.
Submit another query.