DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5245 and Zfp850

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001241880.1 Gene:Zfp850 / 100043772 MGIID:3036281 Length:689 Species:Mus musculus


Alignment Length:471 Identity:161/471 - (34%)
Similarity:230/471 - (48%) Gaps:37/471 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PSKLKTCKSKIAKKRPLRKQTDT------FKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSK 117
            |.:.|.|......::.|.:....      |:|.:|.|.|....:|..|..:||..:|:||:.|.|
Mouse   199 PYECKDCGKAFRLQQHLTRHQKAHSGERPFECNECGKFFKHGSSLVQHKIIHAGVKPYECNECGK 263

  Fly   118 SFGRRTHYKRHLLKH-EKRPHKCSHCSKTFTQNSSL-KQHLHEHTGERPFKCTQCSTSFARKSH- 179
            :|.||:::.||...| :|:|.:|..|...||..:.| .|..:.|.|::.|:|.||...|:..|: 
Mouse   264 AFNRRSNFMRHQKVHYDKKPFQCKECGSAFTVLAQLITQPQNIHNGKKSFECKQCGKIFSNGSYH 328

  Fly   180 -----------------------LQV----HLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQE 217
                                   |||    |.:||::|:||:|..|...|:...||.||.|.|.:
Mouse   329 IQHQSIHSSEKAFGCHVCGKAFRLQVYLSEHQKTHTDEKPFKCNLCGSVFRRKYHLTEHQRIHTD 393

  Fly   218 ARPFKCSHCSKSFKLRSILQKHLLTHAE-RSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHC 281
            .:.::|..|.|.|:.||...:|...|.. :.|||..|...|.....|..|.|:|..|.|::|..|
Mouse   394 VKLYQCKECGKLFRRRSNFMEHQSIHTNVKPFKCELCGSAFRLQSLLSQHQRIHTDEKPYQCKEC 458

  Fly   282 SETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSH 346
            .:.|.|.|....||..|...:|.||..|.:.|.::||...|.|:||.|:.|:|.||.|.|.:.|:
Mouse   459 GKFFRRRSNFTEHLSIHTNVKPFKCELCGSAFRLQSLLNQHQRIHTGEKPYQCKECGKFFRRSSN 523

  Fly   347 LVEHQQVHTGERPFKCTHCFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHT 411
            ..||:.:||..:||||..|...|:.::.|..|...|.|||..:|..|.|.|:..|....||..||
Mouse   524 FTEHRSIHTNVKPFKCELCGSAFRLQSLLSQHQRIHTGEKPYQCKECGKFFRRRSNFTEHLSIHT 588

  Fly   412 GKNQFECPHCSKSYTTSSTLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSH 476
            ....|:|..|...:...|.|:.|.|.||||.|::|..|.|.|.||:...|||..|||:||:.|:.
Mouse   589 NVKPFKCELCGSDFRLQSLLNQHQRIHTGEKPYQCKECGKFFRRSSNFTEHLSIHTGKKPFDCNK 653

  Fly   477 CSTRYTQKSSLGRHLR 492
            |...:.....|.||.|
Mouse   654 CGKVFRLNIHLIRHQR 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 153/440 (35%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/20 (30%)
C2H2 Zn finger 167..187 CDD:275368 9/47 (19%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Zfp850NP_001241880.1 KRAB 14..75 CDD:214630
C2H2 Zn finger 174..194 CDD:275368
C2H2 Zn finger 202..222 CDD:275368 3/19 (16%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
zf-C2H2 256..278 CDD:395048 9/21 (43%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
COG5048 279..671 CDD:227381 137/391 (35%)
C2H2 Zn finger 286..307 CDD:275368 6/20 (30%)
C2H2 Zn finger 315..335 CDD:275368 5/19 (26%)
C2H2 Zn finger 343..363 CDD:275368 4/19 (21%)
C2H2 Zn finger 371..391 CDD:275368 8/19 (42%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368 7/19 (37%)
C2H2 Zn finger 511..531 CDD:275368 8/19 (42%)
C2H2 Zn finger 539..559 CDD:275368 5/19 (26%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 6/19 (32%)
C2H2 Zn finger 623..643 CDD:275368 9/19 (47%)
C2H2 Zn finger 651..671 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.