DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5245 and Gm14399

DIOPT Version :10

Sequence 1:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001375415.1 Gene:Gm14399 / 100043761 MGIID:3650082 Length:610 Species:Mus musculus


Alignment Length:449 Identity:178/449 - (39%)
Similarity:256/449 - (57%) Gaps:9/449 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PSKLKTCKSKIAKKRPLRKQTDT------FKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSK 117
            |...|.|....|:...||....|      ::|.||.|.|.|:.:|:.|.:.|..|:|:||:.|.|
Mouse   130 PYDCKQCGKAFARSCHLRMHNRTHAGEKQYECNQCGKAFKRRSDLQIHKQTHTGEKPYECNQCGK 194

  Fly   118 SFGRRTHYKRHLLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQ 181
            :|.|..|.:.|...|. ::|::|..|.|.|..:..|::|...||||:|::|.||..:|::.|||:
Mouse   195 AFARSCHLRIHKRTHTGEKPYECKQCGKAFVSSGDLQKHKRTHTGEKPYECKQCGKAFSQSSHLR 259

  Fly   182 VHLRTHSEERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AE 245
            :|.|||:.|:|:||..|.|||..:..||:|.|||...:|::|..|.|:|...|.|..|...| .:
Mouse   260 IHKRTHTGEKPYECNQCGKAFARSGDLQKHKRTHTGEKPYECKQCGKAFAHSSHLHIHERRHTGD 324

  Fly   246 RSFKCTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCS 310
            :.::|.||.|.|....:||:|.|.|.|:.|::|..|.:.|.....||:|...|.|::|.:|.||.
Mouse   325 KPYECKQCGKAFAVFYTLQMHKRTHTGDKPYECKQCGKAFTVIYTLQMHKQTHTGEKPYECKQCG 389

  Fly   311 ATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTHCFKDFKCRTHL 375
            ..|:.....|:|.|.||.|:.|:|.:|.|:|.:.....||::.||||:|::|..|.|.|..|..|
Mouse   390 KAFSQSRHLRIHKRTHTEEKPYECNQCGKAFARSGDQQEHKRTHTGEKPYECNQCGKAFIRRRVL 454

  Fly   376 RVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSSTLHMHLRTHTG 440
            ::|...|.|||..:|..|.|.|..||.|.:|.:.|||:..:||..|.|::..||||.:|.|||||
Mouse   455 QIHKRTHTGEKPYECKQCGKAFAGSSHLRIHKRTHTGQKPYECNQCGKAFAKSSTLQIHNRTHTG 519

  Fly   441 ELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHLRRTLCGTK 499
            |.|::|..|.|.|......|.|.|||||||||:|..|...:...|.|.:| :||..|.|
Mouse   520 EKPYECYQCGKAFITRRVLQIHKRTHTGEKPYECKQCGKAFASSSDLQKH-KRTHSGEK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5245NP_650197.1 COG5048 74..478 CDD:227381 166/411 (40%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
C2H2 Zn finger 112..132 CDD:275368 7/19 (37%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 9/19 (47%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..492 CDD:275368 5/17 (29%)
Gm14399NP_001375415.1 KRAB 3..44 CDD:460171
COG5048 <53..199 CDD:227381 23/68 (34%)
C2H2 Zn finger 79..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
zf-H2C2_2 118..142 CDD:463886 3/11 (27%)
C2H2 Zn finger 133..153 CDD:275368 5/19 (26%)
C2H2 Zn finger 161..181 CDD:275368 8/19 (42%)
COG5048 185..571 CDD:227381 157/386 (41%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
C2H2 Zn finger 413..433 CDD:275368 6/19 (32%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..517 CDD:275368 9/19 (47%)
C2H2 Zn finger 525..545 CDD:275368 7/19 (37%)
C2H2 Zn finger 553..573 CDD:275368 6/20 (30%)
zf-H2C2_2 565..590 CDD:463886 6/14 (43%)
C2H2 Zn finger 581..601 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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