DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and AT5G25520

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_001331211.1 Gene:AT5G25520 / 832627 AraportID:AT5G25520 Length:1007 Species:Arabidopsis thaliana


Alignment Length:1152 Identity:236/1152 - (20%)
Similarity:366/1152 - (31%) Gaps:391/1152 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1019 VLTVASSPMRIPMAKPAK-KFPTGAISHQQQQQLNFIRLGPSPGKRISETLCVVCKRPASTSSVY 1082
            |..:...||.|.::.|.. :|...|:|.|....::            :::|....:.|.|..   
plant    44 VSEIEQEPMEISVSGPLSFQFEPEAVSFQSSMLVD------------TQSLMPQLQLPYSVE--- 93

  Fly  1083 CGEECIRKYAQSAIQAHAATKGPLPQNAGAQSLLNNSFDAKKNKKKDLFEDVLRQADTVSKVERI 1147
                  |..|..:.......|.| |::..:.|..:...|| .||:             |..|...
plant    94 ------RSVAACSNSVTGKRKSP-PESTLSGSATSEKLDA-SNKR-------------VEPVHHR 137

  Fly  1148 NVFERKSGRVI-TGHMAPSAHQFRKWLQENPSFEVLPSGTVQSADAEKRLLKGAPEAATSTSEPA 1211
            ...|:.....| .|||.|.|....|       .|.||:...:....|....|...:.........
plant   138 PWLEQFYSECIQRGHMPPPATLSTK-------TEHLPTPAKKVRQMEPASQKSGKQVMNKKQAGL 195

  Fly  1212 VLGVAKKPPEGPAKLSHPQNTTVQAS----HQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGK 1272
            ..|..|...:|...|......::.|:    |:   ....|..||:.|....:|.....|..|:..
plant   196 SQGSVKTLNDGNESLRSKMKESLAAALALVHE---HEESPKEKKNSETEEASVPVADSNEPASAC 257

  Fly  1273 PEPVRIG----IRRSLREQLLAR-------------------------IKEAQAAE--------- 1299
            ...|.:|    ...|.|::...:                         :::.|..|         
plant   258 GTSVTVGEDITPAMSTRDESFEQKNGNGRTLSQESSKDTKMNYVNQSDVQKTQFDEVFPCDDVRF 322

  Fly  1300 ---------------------------ENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAK 1337
                                       ||..|.:.:.|.:|     ...:|||:|..|| .|..|
plant   323 SDSIFTGDELLQGNGLSWVLEPVSDFGENETQKSFEDPELL-----ASKIELELFKLFG-GVNKK 381

  Fly  1338 YKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLDMI--K 1400
            ||.|.|||:||:||:.|..|.|.:.:.::.|.:|..||.|:|||:||::||:.:.....:|:  :
plant   382 YKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAEMVVLR 446

  Fly  1401 KSELDLLACAQNYVVKTHKGE-EVIATKVDVTLPEENVSEASSMADTKQTSLVSEPSTSTLERST 1464
            .:::|:    :|.|.|||||| :|....||           |...|      ||...||   .|.
plant   447 DTDIDV----RNLVRKTHKGEFQVEIDPVD-----------SGTVD------VSAEITS---NSK 487

  Fly  1465 SREKAGSSKEKRHKSHKHHHRKRSRSRSNS-----------------RGRSVDKRHR-------- 1504
            .|.||.|||.....:.|.:.......:||.                 :|.|:|...:        
plant   488 PRAKAKSSKSSTKATLKKNDSNDKNIKSNQGTSSAVTLPPTEEIDPMQGLSMDDEMKDVGFLPPI 552

  Fly  1505 -------------------RQHNEGGEQPGSGEREHR--SREKQSRERDEIVPSPLPKKRDENDQ 1548
                               .:|..|.|.|.|.:.:.:  |..|.        ||..||      |
plant   553 VSLDEFMESLNSEPPFGSPHEHPPGKEDPASEKSDSKDGSHSKS--------PSRSPK------Q 603

  Fly  1549 SP-VPKKTAEKKTEASAYNLVDQILESEKTVEQAANLGKPKPSPKPLPTLPSSLKAPEPMDNYSR 1612
            || .|.::...|||....|::                   .|.|.....|...:..||   |.| 
plant   604 SPKEPSESVSSKTELEKTNVI-------------------SPKPDAGDQLDGDVSKPE---NTS- 645

  Fly  1613 YLHGLTTSSLWSGTLKMIDLADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLKK 1677
            .:..:....:|.|.|::...:...:......|...:... .|:.::|.||:......:::|:|..
plant   646 LVDSIKEDRIWDGILQLSSASVVSVTGIFKSGEKAKTSE-WPTMVEVKGRVRLSAFGKFVKELPL 709

  Fly  1678 SPTKEVVIVNIFPASPSETYKFDLFFEYLDSRQRLGVLGVDSDQIRDFYIFPLGSGDKLPPALQT 1742
            |.::.::::|:...:.....:.|...|.|.       |.....|:...|:.....|        .
plant   710 SRSRVLMVMNVVCKNGISQSQRDSLIESLP-------LSFFLSQVAKSYVADQRVG--------Y 759

  Fly  1743 AEPVPFYEEAQRPNTL---LGIIVRCLSKRPADAVPSTPSVPTPVPALSSKVAKRSRSSISYP-A 1803
            |||....|....| ||   |.::.:.:||...|.|..:..:     .|...|..| |:.::.| :
plant   760 AEPTSGVELYLCP-TLGETLDLLSKIISKDYLDEVKCSEDI-----GLIGVVVWR-RAVVASPGS 817

  Fly  1804 QSSPKRKISTHSTSSKDDEFDIDAIIKAPIAKLQKTAPKVVPQPSVPN-------------DADE 1855
            :..|..|....||.:|..       :.||  :.||:....|..|||.|             |.||
plant   818 RHKPGFKRQHSSTGTKRS-------VLAP--ENQKSRSVSVTNPSVVNVESMRNHGLVGCDDDDE 873

  Fly  1856 PYSPG------GSDDEL-----------VPSAPQRPNDLERQVNEINKQIAAQQMEIAGLLKV-E 1902
            ...||      ..||:|           |.|:| ||....|.::::.:.|          ||. .
plant   874 DMPPGFGPVAAKDDDDLPEFNFNSSSGPVTSSP-RPPLQSRSLDQVRELI----------LKYGN 927

  Fly  1903 PTGSASSSNVLAAISIPANLSKILASIKDKTNLPSSADDGDEEYNPEDDITATSSFASKKPRSKG 1967
            .|||.|..                         |....|.|:    :|||               
plant   928 STGSGSKR-------------------------PWDGHDDDD----DDDI--------------- 948

  Fly  1968 RLAHLSEAELLSMVPDNLAGVIPRSSRTRHQLAQSPLTPTPLPPPPP 2014
                                               |.....||||||
plant   949 -----------------------------------PEWQPQLPPPPP 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367
PHD_PHF3_like 914..963 CDD:277027
BRK 1142..1186 CDD:197800 12/44 (27%)
TFIIS_M 1274..1396 CDD:284835 44/186 (24%)
SPOC 1623..1729 CDD:285043 18/105 (17%)
AT5G25520NP_001331211.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1634
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto3448
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.900

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