Protein Alignment pps and TFIIS

DIOPT Version :10

• Sequence 1: NP_001247075.1
• Gene: pps / 41524
• FlyBaseID: FBgn0082831
• Length: 2018
• Species: Drosophila melanogaster
• Sequence 2: NP_181390.1
• Gene: TFIIS / 818438
• AraportID: AT2G38560
• Length: 378
• Species: Arabidopsis thaliana
• Alignment Length: 288
• Identity: 74/288 - (25%)
• Similarity: 109/288 - (37%)
• Gaps: 74/288 - (25%)

  Fly  1187 VQSADAEKRLLKGAPEAATSTSEPAVLGVAKKPPEGPAK-----LSHPQN---TTVQASHQLGIS 1243
            |...|.||            .|.||.:.|.|......||     ...|.|   |.|:...::...
plant   107 VNKMDVEK------------PSNPAPVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDI 159

  Fly  1244 SV--------RPLAKKDKEKTTPTVQA--PTPNRIAAGKP---------EPVRIGIRRSLREQLL 1289
            .|        |..|.|| ||.:...|:  ..|.:.|...|         :|||..||..|.|.|.
plant   160 KVTNGTKIDYRGQAVKD-EKVSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALC 223

  Fly  1290 ARIKEAQAAEE---NSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKD 1351
            ....||...|.   |:..|.          :...:||..||...||..||: |.||||:|||::|
plant   224 RVAGEADDYERESVNASDPL----------RVAVSVESLMFEKLGRSTGAQ-KLKYRSIMFNLRD 277

  Fly  1352 RKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRH---------QLDMIKKSELDLL 1407
            ..|..|..::...::.|.:|:.::.|.:||.:    |::||..         :..:..|:..|..
plant   278 SNNPDLRRRVLTGEISPEKLITLSAEDMASDK----RKQENNQIKEKALFDCERGLAAKASTDQF 338

  Fly  1408 ACAQ-------NYVVKTHKGEEVIATKV 1428
            .|.:       .|.::|...:|.:.|.|
plant   339 KCGRCGQRKCTYYQMQTRSADEPMTTYV 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pps	NP_001247075.1	DUF3295	641..>914	CDD:403030
		TNG2	<827..965	CDD:227367
		PHD_PHF3_like	914..963	CDD:277027
		BRK	1141..1184	CDD:462196
		TFIIS_M	1274..1399	CDD:462184	40/136 (29%)
		SPOC_PPS-like	1622..1764	CDD:439214
TFIIS	NP_181390.1	TFSII	21..378	CDD:273592	74/288 (26%)