DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pps and Setd5

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:XP_006506740.1 Gene:Setd5 / 72895 MGIID:1920145 Length:1467 Species:Mus musculus


Alignment Length:1803 Identity:331/1803 - (18%)
Similarity:536/1803 - (29%) Gaps:637/1803 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 IQMPATKSVPAVFALGRG------------LPSTSFLKIRPTH----------QSLPVK-----R 474
            |:..:::|.||.....||            .|:.:...:..||          :.||..     .
Mouse     8 IKKNSSESKPAQSGFSRGNSPLCCPESVEASPAVNEKSVYSTHNYGTTQRHGCRGLPYADHNYGA 72

  Fly   475 PPLPTTPAN---------SNVRRMPAVQLGRIVNSPQEVKEIIINKNMASPKGVFTNLNTLLGED 530
            ||.||.||:         |::..:|:....|..:||....|.:   ....|.|:..: ..||..|
Mouse    73 PPPPTPPASPPVQTIIPRSDLNGLPSPVEERCGDSPNSEGETV---PTWCPCGLSQD-GFLLNCD 133

  Fly   531 NNAATKSSPVPLRHRAVM-----SPSTPRSSYNQQMSPIVVPVPAQAHTPSKGFMPIGVDTAQSH 590
            .........|...||...     ..|:...|:::::||..|...|..|||:.  :.:.|...:..
Mouse   134 KCRGMSRGKVIRLHRRKQDNISGGDSSATESWDEELSPSTVLYTATQHTPTS--ITLTVRRTKPK 196

  Fly   591 KLPAQIVIETHQSSSELAAENDKQLDLINSIVQDELLKSTLVEQPVVNADEDIPKLVKMLESTAA 655
            |         .:.|.|......|...:.||                       |...:.|:....
Mouse   197 K---------RKKSPEKGRAAPKTKKIKNS-----------------------PSEAQNLDENTT 229

  Fly   656 DLDPPPVSLPTNIFPAPEMQGVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQFEAE-V 719
            :.....:.|.|:.:.    :...|..:||..|.::            ||    :..:|:|..: .
Mouse   230 EGWENRIRLWTDQYE----EAFTNQYSADVQNALE------------QH----LHSNKEFVGKPA 274

  Fly   720 VKQVLASTEPGTLDAIVSMPTSIEPVDVPQVQAHTNLLPNASLTEPAQSMTSLPIACSTPSRSVA 784
            :...:..||....:.::.....::...|.:||.|..:|..|                    |.:|
Mouse   275 ILDTINKTELACNNTVIGSQMQLQLGRVTRVQKHRKILRAA--------------------RDLA 319

  Fly   785 ASTPPTSAKVVRGYGRVI-----------YLPP----------------IEAPT----TRAKRRA 818
            ..|     .::...|:|:           :..|                ::|.|    .|..||:
Mouse   320 LDT-----LIIEYRGKVMLRQQFEVNGHFFKKPYPFVLFYSKFNGVEMCVDARTFGNDARFIRRS 379

  Fly   819 QFPS-------APGM---------AATSSSDA--------GNLSFGESSLDASINQPLNTSSLSN 859
            ..|:       |.||         |.|..::.        .|.::   .:|.:.::. |.:....
Mouse   380 CTPNAEVRHMIADGMIHLCIYAVSAITKDAEVTIAFDYEYSNCNY---KVDCACHKG-NRNCPIQ 440

  Fly   860 DSQPGSG--PKRPNPREPSM---ARRSTAPRRSKKLDASQNND-----PD-----------ASES 903
            ...|.:.  |..|.|..|::   .||..|  |.|:|:..|.|:     ||           .|..
Mouse   441 KRNPNAAELPLPPPPSFPTIGAETRRRKA--RRKELELEQQNEVPEENPDPQPQEVPEKVTVSNE 503

  Fly   904 QEDDDDPNKLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCVKRQE 968
            .|:.|:|.:      :|.........|..|:..|      ::....|.:.:.|........||::
Mouse   504 HEEVDNPEE------KPEEEEKEEATDDQENSAH------SRRTREDRKVEAIMHAFESLEKRKK 556

  Fly   969 ERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIV-------------------QVAAPSAP-- 1012
            .|.||             .||..|:.::.|:::|||                   .||.||.|  
Mouse   557 RRDQP-------------VEQSSSDIEITTSSSEIVVGEETKTAAPESEVSSPVSNVAIPSTPQS 608

  Fly  1013 -----RRTLPVVLTVASSPM-RIPMAKPAKKFPTGAISHQQQQQLNFIRLGPSPGKRISETLCVV 1071
                 ||:.......|..|: :.|.|||::                     |.|..|||.     
Mouse   609 TGVNTRRSSHAGDVAAEKPIPKPPPAKPSR---------------------PRPKSRISR----- 647

  Fly  1072 CKRPASTSSVYCGEECIRKYA---QSAIQAHAATKGPLPQNAGAQSLLNNSFDAKKNKKKDLFED 1133
             .|.:|...:...::.|.:.|   |:|::...:.....|..||      |:..:.:|::      
Mouse   648 -YRTSSAQRLKRQKQAIAQQAELSQAALEEGGSNNSVTPPEAG------NTDSSGENRQ------ 699

  Fly  1134 VLRQAD-TVSKVERINVFERKSGRVITGHMAPSAHQFRKWLQENPSFEVLPSGTVQSADAEKRLL 1197
             |..:| ||..|...:|     .|..:.:.....:...:||.:.               |||:  
Mouse   700 -LTGSDPTVISVTGSHV-----NRAASKYPKTKKYLVTEWLNDK---------------AEKQ-- 741

  Fly  1198 KGAPEAATSTSEPAVLGVAKKPPEGPAKLSHPQNTTVQASHQLGISSVRPLAKKDKEKTTPTVQA 1262
                               :.|.|.|.:::                            |.|||.|
Mouse   742 -------------------ECPVECPLRIT----------------------------TDPTVLA 759

  Fly  1263 PTPNRIAAGKPEP---------VRIGI--------RRSLREQLLARIKE---AQAAEENSGQPTT 1307
            .|.|.:......|         :|.|.        |..|.:...:..|:   .||.||...| |:
Mouse   760 TTLNMLPGLIHSPLICTTPKHYIRFGSPFMPERRRRPLLPDGTFSSCKKRWIKQALEEGMTQ-TS 823

  Fly  1308 QWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLV 1372
            ..|.........::.|....:|..:|        ...|:..:|..|:|.|.|:...|.::|...|
Mouse   824 SVPQETRTQHLYQSNETSNSSSICKD--------NADLLSPLKKWKSRYLMEQNITKLLQPLSPV 880

  Fly  1373 RMTP-------EQLASQELAKWREEENRH----------------------QLDMIKKSELDLLA 1408
            ...|       .||.:.......|||.|:                      |.::..:.:|||  
Mouse   881 TPPPPSSGSKSPQLTTPGQTHPGEEECRNGYSLMFSPITSLTTASRSNTPLQFELCHRKDLDL-- 943

  Fly  1409 CAQNYVVKTHKGEEVIATKVDVTLPEENV---SEASSMADTKQTSLVSEPSTSTLERSTSREKAG 1470
                             |||.  .|:.:.   ::..|:.:.....|.|.||......:....::|
Mouse   944 -----------------TKVG--FPDSSTHSCADRPSLLNCNHPDLASHPSVVPTSEAGFPSRSG 989

  Fly  1471 SSKEKRHKSHKHHHRKR-------------SRSRSNSRGRSVDKRHRRQHNEGGE-QPGSG---E 1518
            ...:...::.....|..             .|:....||..:....:..|.:||. .|..|   .
Mouse   990 DGPQTLLRNSDQAFRTEFNLMYAYSPLNAMPRADGLYRGSPLVGDRKPLHLDGGYCSPAEGFSSR 1054

  Fly  1519 REHRSREKQSR-------ERD-EIVPS-----PLPKK------------RDENDQSPVPKKTAEK 1558
            .||...:..||       ||. |.|||     |..||            ..||.........::.
Mouse  1055 YEHGFMKDLSRGSMSPGGERTCEGVPSAPQNPPQRKKVSLLEYRKRKQEAKENSGGGNDSSQSKS 1119

  Fly  1559 KTEASAYNLVDQILESEKTVEQAANLGKPKPSPK---PLPTLPSSLKAPEPMDNYSRYLHGLTT- 1619
            |:..:.....:.:.::.....|.::.|.|....|   |..:..|.|:|..|.|:     .|.:: 
Mouse  1120 KSSGAGQGSSNSVSDTGAHGVQGSSAGTPSSPHKKFSPSHSSASHLEAVSPSDS-----RGTSSS 1179

  Fly  1620 --------SSLWSGTLKMIDLADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLK 1676
                    ||.|               |.|......:.|..:|       ::.|.:| ...:|.:
Mouse  1180 HCRPQENISSRW---------------MVPTSVERLREGGSIP-------KVLRSSV-RVAQKGE 1221

  Fly  1677 KSPTKEVVIV--NIFPA------------SPSETYKFDLFFEYLDSRQRLGVLGVDSDQIRDFYI 1727
            .|||.|..|.  ...||            |...|.       |..||....:|..||.:.....:
Mouse  1222 PSPTWESNITEKESDPADGEGPEPLSSALSKGATV-------YSPSRYSYQLLQCDSPRTESQSL 1279

  Fly  1728 FPLGSGDKLPPALQTAEPVPFYEEAQRPNTLLGIIVRCLSKRPADAVPSTPSVPTPVPALSSKVA 1792
            ....|.             ||   ...|....|...|..:.||.:. ||..|            :
Mouse  1280 LQQSSS-------------PF---RGHPTQSPGYSYRTTALRPGNP-PSHGS------------S 1315

  Fly  1793 KRSRSSISYPAQSSPKRKISTHSTSSKDDEFDIDAIIKAPIAKLQKTAPKVVPQPSVPNDADEPY 1857
            :.|.||.|||   ||...:||.|                 :|....|......||...|......
Mouse  1316 ESSLSSTSYP---SPAHPVSTDS-----------------LAPFTGTPGYYSSQPHSGNSTGSNL 1360

  Fly  1858 SPGGSDDELVPSAPQRPNDLERQVNEINKQIAAQQMEIAGLLKVEPTG---SASSSNVLAAISIP 1919
            .............||.|:|                         .||.   |.||:..|::.|.|
Mouse  1361 PRRSCSSSAASPTPQGPSD-------------------------SPTSDSVSQSSTGTLSSTSFP 1400

  Fly  1920 ANLSKILASIKDKTNLPSSADDGDEEYNPEDDITATSSFASKKPRSKG 1967
            .|....|.|.....:||::   |.........::|.|:......|..|
Mouse  1401 QNSRSSLPSDLRTISLPNA---GQSAAYQASRVSAVSNSQHYPHRGSG 1445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 30/166 (18%)
PHD_PHF3_like 914..963 CDD:277027 6/48 (13%)
BRK 1142..1186 CDD:197800 5/43 (12%)
TFIIS_M 1274..1396 CDD:284835 32/170 (19%)
SPOC 1623..1729 CDD:285043 23/119 (19%)
Setd5XP_006506740.1 SET_SETD5 292..441 CDD:380958 26/177 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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