DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and setd1ba

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_001038599.2 Gene:setd1ba / 567970 ZFINID:ZDB-GENE-050309-289 Length:1844 Species:Danio rerio


Alignment Length:1996 Identity:373/1996 - (18%)
Similarity:569/1996 - (28%) Gaps:741/1996 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 RQKPEIIANNSVNARLRPTRAPVKVIAPPVQEYIEDDDDAQSSDSAEE--ENADKAYDSEEMSEE 358
            ||||:             ||....|  |..:..:.:|...:.|.|...  :|:.....|.|    
Zfish    13 RQKPQ-------------TRGTQYV--PGERNKLNEDHGRRQSSSLANGMDNSHPICSSGE---- 58

  Fly   359 SDEFQESDNDRDSDMDFDMRHSNRRNPNKRKRVRKVVR------QTPSKPMKPLPPPPTTPQHFP 417
                :.|.:.|...:..|        |..:|...||.|      .|||..|.|:           
Zfish    59 ----KRSHHWRSYKLIID--------PALKKGSHKVYRYDGHQFSTPSFGMSPV----------- 100

  Fly   418 ELKKRKEVLEPKAPQIGQIIQMPATKSVPAVFALGRGLPSTSFLKIRPTHQSLPVKR-------- 474
                  :::  :.|:||::                       :.|.:.|  .|||.:        
Zfish   101 ------DIV--RDPRIGRL-----------------------WTKYKET--DLPVPKFKIDECYV 132

  Fly   475 ---PPLPTTPA--NSNVRRMPAVQLGRIVNSPQEVKEIIIN----KNMASPKGVFTNLNTLLGED 530
               ||...|.|  |.|||......:.:.....:|| ||:.|    |::...|.||..:.      
Zfish   133 GRVPPKEVTFAKLNDNVREGFLTDMCKKFGDIEEV-EILYNPKNKKHLGIAKVVFETVK------ 190

  Fly   531 NNAATKSSPVPLRHRAVMS---------PSTPRSSYNQQM-----SPIVVPVPAQ---------- 571
               |.|.:...|.:.:||.         ....|..|.|::     :|:.:||..:          
Zfish   191 ---AAKDAVQNLHNTSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVGGEEACDVSPRSL 252

  Fly   572 -----AHTPSK-----------GFMPIGVDTAQSHKLPAQIVIETHQSSSELAAENDKQLDLINS 620
                 |..||:           |..|.|.:|..|        ::|..||..              
Zfish   253 AEALMACEPSRRLFEGGSSVVAGTTPSGTNTPMS--------LDTAYSSLR-------------- 295

  Fly   621 IVQDELLKSTLVEQPVVNADEDIPKLVKMLESTAADLDPPPVSLP------------TNIFPAPE 673
                                :|.|      :|......|.|...|            |..|.|..
Zfish   296 --------------------QDTP------QSQGTPHTPRPSGTPFSQDSSYSSRQGTPAFQANR 334

  Fly   674 MQGVGN-AAAADPNNIMDTAN---------------EDEITADFLQHVVGLIEEDKQFEAEVVKQ 722
            .:..|. .:........|..|               ..|....|.||.          ..|....
Zfish   335 AESSGGYKSRRHETKFQDAYNRRPERRYVHGPTQRGNTEQPPSFKQHQ----------PPEPPSP 389

  Fly   723 VLASTEPGTLDAIVSMPTSIEPVDVPQVQAHTNLLPNASLTEPAQ-------------------- 767
            ....|.|....|  :..|:......|..|.:|    .||..:|.|                    
Zfish   390 AFTHTPPPPTSA--NFKTAYSQYQPPIPQEYT----VASYHQPVQRELDYRRPPQAPPPPSTDFL 448

  Fly   768 ----SMTSLPIACSTPSRSVAASTPPTSAKVVRGYGRVIYLPPIEAPTTRAKR-----RAQFPSA 823
                ..|:.||....|:.....:|||:|..           .|..:||..::|     |.:....
Zfish   449 PVRDRPTTPPIPEPPPAPETQPTTPPSSTP-----------EPCPSPTQESERNSLDSRIEMLLK 502

  Fly   824 PGMAATSSSDAGNLSFGESSLDASINQPLNTSSLSNDSQPGSGPKRPNPREPSMARRSTAPRRSK 888
            |.:.....|||      |..:|.|   |:::||......|...|.||:         ||...   
Zfish   503 PFLNERGDSDA------EVRMDGS---PISSSSSQLSPIPPQRPSRPS---------STGLE--- 546

  Fly   889 KLDASQNNDPDASESQEDDDDPNKLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMG---TD 950
              |.|....||:     :||:|                         ..||...:..:.|   |:
Zfish   547 --DISPTPLPDS-----EDDEP-------------------------IRGTASLLANSRGMSPTN 579

  Fly   951 MENKGIDWKCPKCVKRQEERSQPRITDMLVT---RPTTQPEQRPSETKVLTTTAEIVQVAAPSAP 1012
            |.:|....:....:.:.:...|....||.::   .|.|.......:..::..:|           
Zfish   580 MHSKSCVGEPRTAIDKMDTGHQSSGEDMEISDDEMPGTPIASGDCDKNIVVNSA----------- 633

  Fly  1013 RRTLPVVLTVASSPMRIPMAKPAKKFPT--------GAISHQQQQQLNFIRLGPSPGKRISETLC 1069
               |.::.|:...|...|....|..||.        ..:||                        
Zfish   634 ---LSLIQTIPMPPPGFPPLPHAAGFPLPPHHLPHHSTVSH------------------------ 671

  Fly  1070 VVCKRPASTSSVYCGEECIRKYAQSAIQAHAATKGPLPQNAGAQSLLNNSFDAKKNKKKDLFEDV 1134
                                      :.:|.....||           :|:........||...:
Zfish   672 --------------------------LPSHHPMLHPL-----------HSYGMMHFLPVDLLSSL 699

  Fly  1135 --LRQADTVSKVERINVFERKSGRVITGHMAPSAHQFRKWLQENPSFEVLPSG------TVQSAD 1191
              |.|.....:.:.::...:........:.||||         ||:  .:|.|      :|.||.
Zfish   700 PQLLQMPFQMQTQMLSRMAQSQHPYAYPYPAPSA---------NPA--AMPFGGPYPPLSVVSAP 753

  Fly  1192 AEKRLLKGAPEAATSTSE--PAVLGVAKKPPEG--PAKLSHPQNTTVQASHQLGISSVRPLAKKD 1252
            |:  .|.|.|....|..:  |||      ||.|  |.| ..|...|:.......:..::.:.|||
Zfish   754 AD--TLHGQPWPLPSMPQFNPAV------PPPGYEPQK-EDPHKATIDGVLMAIVKELKAIMKKD 809

  Fly  1253 KEKTTPTVQA------------------PTPNRIAAGKPEPVRIGIRRSLREQLLARIKEAQAAE 1299
            ..:....|.|                  .||.:...||.|           |:..|:.||..::.
Zfish   810 LNRKMVEVVAFRKFDEWWDKQELSAKATLTPVKTGEGKDE-----------EKERAKPKETMSSH 863

  Fly  1300 --ENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKIC 1362
              .|.|:...                   |...|..:|.:   ..|...|.:| ||         
Zfish   864 LPWNKGEGLG-------------------FEGMGLGIGLR---GIRLPSFKVK-RK--------- 896

  Fly  1363 AKQVEPRQL---VRMTPEQLASQELAKWREEENRHQLDMIKKSELDLLACAQNY-----VVKTHK 1419
             :..||...   .|:.|......||    |:|...::.....|.:|....:...     :....:
Zfish   897 -QPPEPTSTSDNKRVRPSTPVDDEL----EDEESERMGRTDGSRVDPAGSSSKRRPARPLELDSE 956

  Fly  1420 GEEVIATKVDVTLPEENVS--EASSMADTKQTSLVSEPSTSTLERSTSREKAGSSKEKRHKSHKH 1482
            |||           ||..|  |.||::|.::     ||.....||.:|.:......||  ||..|
Zfish   957 GEE-----------EEETSGKEESSLSDHEE-----EPVDDASERLSSGKDLEEEDEK--KSESH 1003

  Fly  1483 HHRKRSRSRSNSRGRSVDKRHRRQHNEGGEQPGSGEREHRSREKQSRERDEIVPSPLPKKRDEND 1547
            .....|...|:....|.........:.|.|.....|......|::..|.:.||...     ||.|
Zfish  1004 SSESESSDSSDDEASSSSSSKSGSDSSGSESSSDYESSSEEEEEEEEEEERIVGMD-----DEED 1063

  Fly  1548 QSPVPKKTAEKKTEASAYNLVDQILESEKTVEQAANLGKPKPSPKPLP----------------- 1595
                    .:.:|..|:........:.|:.||..|......|.|:..|                 
Zfish  1064 --------VDARTSTSSSTTSTSSSDEEEVVEVKAPSTPTGPPPEEEPNELGRLEAVDEAEIDHK 1120

  Fly  1596 --------TLPSSLKAPEPMDNYSRYLHGLTTSSLWSGTLKMIDLADFEIVMYPVQGNCHQLGNL 1652
                    |....::.|.|        .||....|      .:|| :.:|.:...:.:..::|||
Zfish  1121 PSMVSLIKTKVEEVRPPSP--------KGLPADEL------DVDL-EVKIPVPKTEASLEEVGNL 1170

  Fly  1653 MP---------SQMDVIGRITRVNVWEYIKKLKKSPTKEVVIVNIFPASPSETYKFDLFFEYLDS 1708
            .|         |..|     ||          .|.||::      ||.:|.......|..|....
Zfish  1171 RPPTPTGSFADSDQD-----TR----------PKIPTED------FPRTPGHEGPVPLESETTVP 1214

  Fly  1709 RQRLGVLGVDSDQIRDFYIFPLGSG------DKLPP-----------ALQTAEPVPFYEEAQRPN 1756
            |.    |...|..:      ||...      ..|||           .|.|.|.:|     :.|.
Zfish  1215 RS----LPTPSMHL------PLPPSHVPDPQSLLPPPETLPDMPVRGRLPTEEDIP-----RTPG 1264

  Fly  1757 TLLGIIVRCLSK-RPADAVPSTPSVPTPVPALSSKVAKRSRSSISYPAQSSPKRKISTHSTSSKD 1820
            ..|....|.|.| :..|.||.||...||:...|........|..||||| ||........|..:|
Zfish  1265 RDLMDRARGLGKLQSTDTVPVTPGSDTPLTGNSLSSPHILGSPFSYPAQ-SPVLSAGIPRTPGRD 1328

  Fly  1821 ----DEFDIDAIIKAPIAKLQKTAPKVV--------------PQPSVPNDADEPYSPG------G 1861
                ..|...|.:.|.:...:|.:.:::              ||.|:||:|.....||      .
Zfish  1329 LTFAPAFPDSAGLSAGLPIHRKASSEILEEKPLFKEPLLSASPQASLPNNAASSPFPGPPLPTAS 1393

  Fly  1862 SDDELVPSAPQRPNDLERQVNEINKQIAAQQMEIAGLLKVEPT-----------GSASSS----N 1911
            ..:..:|.....|..:|.......|::....:::...|...|:           |...|.    .
Zfish  1394 LPEPALPPQGSPPASIENSFPASPKELPVPMIDVPVPLDDTPSKKKLVRSKNKKGIQDSEEPQVT 1458

  Fly  1912 VLAAISIPANLSKILASIKDKTNLPSSA---DDGDEEYNPEDDI--------TATSSFASKKPRS 1965
            ::.|.|:|.     |.......:|||.:   :||:..::.:::.        ...:||..::|..
Zfish  1459 LIEASSLPE-----LPVNNQYPDLPSESIKEEDGEPAFSEKEESQVPTIIPKVEETSFYVEEPIQ 1518

  Fly  1966 KGRLAHLSEAE-LLSMVPDNLAGVIPRSSRTRHQLAQSPLTPTPLP 2010
            |.|.......| ||||                |....||..|:.:|
Zfish  1519 KTRRQRRGWQELLLSM----------------HSPVASPRRPSFMP 1548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 28/140 (20%)
PHD_PHF3_like 914..963 CDD:277027 6/51 (12%)
BRK 1142..1186 CDD:197800 8/49 (16%)
TFIIS_M 1274..1396 CDD:284835 23/126 (18%)
SPOC 1623..1729 CDD:285043 22/114 (19%)
setd1baNP_001038599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..58 9/41 (22%)
RRM_SF 136..228 CDD:302621 25/101 (25%)
RRM <144..>232 CDD:223796 21/97 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..288 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..562 64/386 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..871 11/43 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..1108 56/263 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1160..1341 53/217 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1367..1499 25/136 (18%)
N-SET 1556..1695 CDD:288597
SET <1619..1844 CDD:225491
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1647..1678
SET 1705..1828 CDD:214614
PostSET 1828..1844 CDD:214703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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