DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and kdm7ab

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:XP_005174379.1 Gene:kdm7ab / 503902 ZFINID:ZDB-GENE-050309-32 Length:919 Species:Danio rerio


Alignment Length:983 Identity:180/983 - (18%)
Similarity:311/983 - (31%) Gaps:376/983 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   912 KLWCICRQPHN-NRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKC---------VKR 966
            :|:|:||||:: :||||.||:|:|||||:||.|.:....|::    .:.||.|         .||
Zfish     5 QLYCVCRQPYDVSRFMIECDICKDWFHGSCVEVEEHYAVDID----VYHCPNCDVHHGPSLMKKR 65

  Fly   967 Q----------EERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIVQ-VAAPSAPRRTL---- 1016
            :          ::.|:|       .:..|....|..:.:...:..||:| :......:|.|    
Zfish    66 RNWHRHDYTEPDDGSKP-------VQAGTSVFVRELQARTFPSGDEILQPMHGGQVTQRYLERHG 123

  Fly  1017 ---PVVLTVASS-PMRIP-----------------------MAKPA------KKFPTGAISHQQQ 1048
               |::::.... .:|:|                       :|:.|      |.|.....|.|:.
Zfish   124 FRYPIIVSKREELGLRLPPPDFSIKDVERYVGGDKVIDVIDVARQADSKMKLKAFVKYYYSPQRP 188

  Fly  1049 QQLNFIRLGPSPGKRISETLCVVCKRPASTSSV--------YCGEECIRKYA-----QSAIQAHA 1100
            :.||.|.|..|..|...  |.||.......|.|        |..:..::||.     .|....|.
Zfish   189 KVLNVISLEFSDTKMAE--LVVVPDIAQKMSWVENYWPDDSYFPKPFVQKYCLMGVKDSYTDFHI 251

  Fly  1101 ATKG------------------PLPQNAGAQSLLNNSFDAKKNKKKDLFED--------VLRQAD 1139
            ...|                  |.|.|..    |...:.:..|:.:..|.:        |:||..
Zfish   252 DFGGTSVWYHVLWGEKIFYLIKPTPANLA----LYEEWSSSPNQSEVFFGEKVDKCYKCVVRQGT 312

  Fly  1140 TV---------------------SKVERINV--------FERKSGRVITGHMAPSAHQFRK---- 1171
            |:                     :.:..:|:        .||:.       ..|...:|..    
Zfish   313 TLLIPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMERRL-------KTPDLFKFPYFEAI 370

  Fly  1172 -WLQENPSFEVLPSGTVQSADAEKRLLKGAPEAATS--------TSEPAVLGVAKKPPE--GPAK 1225
             |.......|.|.....::....:.|:||.....|:        .:||     |.:.|:  .|..
Zfish   371 CWYVAKNLLETLKESREENCLPPEYLIKGVKALITALRNWLKREVTEP-----ASEVPDHIRPNH 430

  Fly  1226 LSHPQNTTVQ--ASHQLGISSVRPLAKKDKEKTTPTVQA---------PTPNRI----------- 1268
            |.......:|  ..:|.|....:|: |..:....|:.::         .|..|:           
Zfish   431 LIKMLTKEIQYLEEYQNGNCGNKPM-KLQESSICPSTRSAHERGSHARKTARRLRGHHHHHHRHH 494

  Fly  1269 -------------AAGKPEPVRIGIRRSLREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVK 1320
                         :.|...|..:.|.....:::|.|::.....|:.|                  
Zfish   495 HHHHHHHHHNHQHSDGPKAPSHLDIYEQHTQEVLKRLEMGPYEEDAS------------------ 541

  Fly  1321 NVELEMFNSFGRDVGAKYKAKYRSLMFNIK-----------DRKNRTLFEKICAKQVEPRQL--- 1371
             ..|::...|.:...|...|..|||..:::           :|::.|.......::.|.|.:   
Zfish   542 -FNLKVNGKFNKVSTASAAAAERSLENDLRLVLCNGQIVRDNRQHVTEKRPRIKEEEEGRDVKRD 605

  Fly  1372 ---VRMTPEQLASQELAKWREEENRHQL--------DMIKKSELDL------------------- 1406
               :::.|::...:...:.:||:.||.:        ||.|:...||                   
Zfish   606 SLKIKLIPKEEEQEVHIQVKEEDKRHLVARGVKDFTDMSKEESSDLRNRESVLSDISSDSESDTE 670

  Fly  1407 -----------------------------------LACAQNYVVKTHKGEEVIATKVDVTLPEEN 1436
                                               .:|: ::.:.|||....|:: .:..|..|:
Zfish   671 FTTQKKNCSEEESESSSEEEEDEKMKRGGDDKVNTKSCS-SFTMDTHKSRRRISS-FEKCLKRES 733

  Fly  1437 VSEASSMADTKQTSLV------SEPSTSTLERSTSREKAGSSKEKRHKSHKHHHRK------RSR 1489
            |:.||:..|..|..|.      |.|   |.:.|:|:|...|  ...|.|.::..:|      ...
Zfish   734 VTLASAEEDAIQGMLAVAGLLYSHP---TKDPSSSQESWWS--RTNHTSPEYSRKKVASGEENQD 793

  Fly  1490 SRSNSRGRSVDKRHRRQHNEGGEQPGSGEREHRSREKQS-------------------------R 1529
            |.|||   |.:....|:|:.||..  |.:.:||.:|.:|                         |
Zfish   794 SDSNS---SQEDFEAREHSGGGCH--SSKLQHRIQEHKSFMDSQGSSSSSSSETWSSCTQSPAHR 853

  Fly  1530 E---------RDEIVPSPLPKKRDENDQSPVPKKTAE----KKTEASAYNLVDQILESEKTVEQA 1581
            |         ...:.|...|.||...:..||..:..:    ||..|:|...:.:||:        
Zfish   854 ESPTMTYQYCETSLSPPLHPSKRPAANPPPVSNQATKGKRPKKGMATAKQRLGKILK-------- 910

  Fly  1582 ANLGKPKP 1589
              |.:.||
Zfish   911 --LSRHKP 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 25/62 (40%)
PHD_PHF3_like 914..963 CDD:277027 23/49 (47%)
BRK 1142..1186 CDD:197800 8/56 (14%)
TFIIS_M 1274..1396 CDD:284835 22/138 (16%)
SPOC 1623..1729 CDD:285043
kdm7abXP_005174379.1 PHD_SF 7..55 CDD:304600 24/51 (47%)
JmjC 202..265 CDD:214721 12/64 (19%)
cupin_like 237..337 CDD:304367 14/103 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1634
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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