DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and AT3G29639

DIOPT Version :10

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_001078223.1 Gene:AT3G29639 / 5008042 AraportID:AT3G29639 Length:181 Species:Arabidopsis thaliana


Alignment Length:108 Identity:24/108 - (22%)
Similarity:39/108 - (36%) Gaps:52/108 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly  1239 QLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRSLREQLLARIKEAQAAEENSG 1303
            ||.:|||.|:|                             ||           .|..:.||    
plant     6 QLSMSSVVPVA-----------------------------GI-----------FKSGEKAE---- 26

  Fly  1304 QPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLM 1346
              |::||.::||.:.|:      .:.||:.:....|::.|:||
plant    27 --TSEWPAMVEVKRRVR------LSGFGKFIQELPKSRTRALM 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 DUF3295 641..>914 CDD:403030
TNG2 <827..965 CDD:227367
PHD_PHF3_like 914..963 CDD:277027
BRK 1141..1184 CDD:462196
TFIIS_M 1274..1399 CDD:462184 17/73 (23%)
SPOC_PPS-like 1622..1764 CDD:439214
AT3G29639NP_001078223.1 SPOC 4..>63 CDD:400205 24/108 (22%)
Blue background indicates that the domain is not in the aligned region.

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