Sequence 1: | NP_001247075.1 | Gene: | pps / 41524 | FlyBaseID: | FBgn0082831 | Length: | 2018 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006235867.1 | Gene: | Dido1 / 362286 | RGDID: | 1311173 | Length: | 2258 | Species: | Rattus norvegicus |
Alignment Length: | 1786 | Identity: | 381/1786 - (21%) |
---|---|---|---|
Similarity: | 612/1786 - (34%) | Gaps: | 610/1786 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 639 ADEDIPKLVKMLESTAADLDPPPVSLP---------TNIFPAPEMQGVGNAAAADPNNIMDTANE 694
Fly 695 DEITADFLQHVVGLIEEDKQ-FEAEVVKQVLAST-EPGTLDAIVSMPTSIEPVD--VPQVQAHTN 755
Fly 756 LLPNASLTEPAQSMTSLPIACSTPSRSVAASTPPTSAKVVRG----------------------- 797
Fly 798 YGRVIYLPPIEAP------TTRAKRRAQFPSAPGMAATSSSDAGNLSFGESSLDASINQPLNTSS 856
Fly 857 LSNDSQPGSGP---KRPNPREPSMARRSTAPRRSKKLDASQNNDP-DASESQEDDD--DPNKLWC 915
Fly 916 ICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKC--VKRQEERSQPRITDM 978
Fly 979 -LVTRPTTQP----------EQRPSETKVLTTTAEIVQVAAPSAPRRTLPVVLTVASSPMRIPMA 1032
Fly 1033 KPAKKFPTGAISHQQQQQLNFIRLGPSPGKRISETLCVVCKRPASTSSVYCGEECIRKYAQSAIQ 1097
Fly 1098 AHAATKGPLPQNAGAQSLLNNSFDAKK-----NKKKDLFEDVLRQADTVSKVERINVFERK--SG 1155
Fly 1156 RVITGHMAP---SAHQFRKWLQENPSFEVLPSG-------------------TVQSADAEKRLLK 1198
Fly 1199 GAPEAATSTSE-----------PAVLG---VAKKPPEG------------------PAKLSHPQN 1231
Fly 1232 TTVQASHQL-GISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEP------VRIGIRRSLREQLL 1289
Fly 1290 ARIKEAQ--AAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDR 1352
Fly 1353 KNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLDMIKKSELDLLACAQNYVVKT 1417
Fly 1418 HKGEEVIATKVDVTLPE--ENVSEASSMADT-KQTSLVSEPSTST---LERSTSREKAGSSKEKR 1476
Fly 1477 H--------------KSHKHHHRKRSRSRSNSRGRSVDKRHRRQHNEGGEQPGSGEREHRSREKQ 1527
Fly 1528 SRERDEIVPSPLPKKRDENDQSPVPKKTAEKKTEASAYNLVDQILESEKTVEQAANLGKPKPS-- 1590
Fly 1591 ----------------------------------------------------------------- 1590
Fly 1591 PKPLPTLPSSLKAPEPMDNYSRYL-----------------HGLTT------SSLWSGTLKMIDL 1632
Fly 1633 ADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLKKSPTKEVVIVNIFPASPSETY 1697
Fly 1698 KFDLFFEYLDSRQRLGVLGVDSDQIRDFYIFPLGSGDKLPPALQTAEPVPFYE---EAQRPNTLL 1759
Fly 1760 GIIVRCLSKRPADA--------------------------------------------------- 1773
Fly 1774 -VPSTPSVPTPVP-----ALSSKVAKRSRSSISYPAQSS-------------------------- 1806
Fly 1807 ---------PKRKIST-------HSTSSKDDEFDIDAIIKAPIAKL--QKTAPKVVPQPSV---P 1850
Fly 1851 NDADEPYSPGGSDDEL---------VPSAP----------------------------------- 1871
Fly 1872 ----QRPNDL------------ERQVNEINKQIAAQQMEIAGLLKVEPTGSASSSNVLAAISIP- 1919
Fly 1920 ANLSKILASIKDKTNLPSSADDGDEE--YNPEDDITATS----SFASKKPRSKGRL-AHLSEAEL 1977
Fly 1978 LSMVPDNLA----GVIP-RSSRTRHQLAQSP 2003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pps | NP_001247075.1 | TNG2 | <827..965 | CDD:227367 | 51/145 (35%) |
PHD_PHF3_like | 914..963 | CDD:277027 | 32/48 (67%) | ||
BRK | 1142..1186 | CDD:197800 | 10/67 (15%) | ||
TFIIS_M | 1274..1396 | CDD:284835 | 47/129 (36%) | ||
SPOC | 1623..1729 | CDD:285043 | 34/105 (32%) | ||
Dido1 | XP_006235867.1 | TNG2 | <157..299 | CDD:227367 | 50/167 (30%) |
PHD_DIDO1_like | 263..316 | CDD:277109 | 35/52 (67%) | ||
TFS2M | 671..772 | CDD:128786 | 44/113 (39%) | ||
SPOC | 1046..1194 | CDD:400205 | 48/152 (32%) | ||
SWIRM-assoc_1 | <1465..1502 | CDD:406808 | 7/41 (17%) | ||
PHA03247 | <1564..2085 | CDD:223021 | 12/41 (29%) | ||
SF-CC1 | 2144..>2182 | CDD:273721 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 108 | 1.000 | Domainoid score | I6312 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1634 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007937 | |
OrthoInspector | 1 | 1.000 | - | - | otm45948 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR11477 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.960 |