DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pps and trr

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_726773.2 Gene:trr / 31149 FlyBaseID:FBgn0023518 Length:2431 Species:Drosophila melanogaster


Alignment Length:2126 Identity:368/2126 - (17%)
Similarity:653/2126 - (30%) Gaps:678/2126 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ADSNLVVVYSKSGISFDERAIGNIMEEKSISTISVVRITSPTPSMVDQEEDE-RLEELANFMETA 82
            :.||.::..:.:..||.::...:.....|.||.||:.| .|:.|..|..|:. :.|:|...:..|
  Fly   150 SQSNPLLHRNTAFTSFTKKEGASSSASSSSSTASVISI-EPSGSGQDHAENSGKSEDLDYVLMPA 213

  Fly    83 TDSE---------------------------LDSDNGSQ--SGGDNASEMDEHDEENHNTGDDNN 118
            :.::                           |:::||:.  ||....:.:.:  :..|...:..|
  Fly   214 SGADSSTSVGNSTGTGTPAGTPIGATTSTIILNANNGTAGVSGAGTTTILTQ--KSGHTNYNIFN 276

  Fly   119 SDSTETEADAPRTRKRVGRKPKAIKKRKRRKPKERPQIVGLRVEQFYADNTADM-VVKNALKLAG 182
            :.:|.::........||...|| :|.:.....|:..::.....:....:.|..: ::|..:..:|
  Fly   277 TTATGSQTPTTTLLNRVNLHPK-MKTQLMVNAKKLSEVTQTTAKVSIGNKTISVPLLKPLMSASG 340

  Fly   183 ---------------------VSVYKRTAETDALMEVIRNDHNYTPFTSPEQLKNHKRDEKMAME 226
                                 |:.....|:.....:|..:.|::......:.:|...::....:.
  Fly   341 AATAGGATIVESKQLLQPGGQVTTVMSAAQQSGGQQVHPHVHSHAHHNFTKLIKRGPKNSGTIVS 405

  Fly   227 MQAQSRKIIMQAPGSVKLINAKKRVQAIPLSPVQVKVQRLPVKPHQVQQAAQLQPKVQLIRKPIH 291
            ......|     |.:.|::..|         .|..|:.:|.....|:||..||| ::|:      
  Fly   406 FSGLQIK-----PANTKIVATK---------VVSKKMLQLQQHQQQIQQQQQLQ-QLQV------ 449

  Fly   292 SPLPRQKPEIIANNSVNARLRPTRAPVKVIAP-PVQEYIEDDDDAQSSDSAEEENADKAYDSEEM 355
                         .|......||.:.|.:... |.|.|....|.|....:|..|  |.|....::
  Fly   450 -------------TSGGGLAPPTGSIVTITTTNPSQTYAMVQDSATVGPAAHSE--DDAPAPRKI 499

  Fly   356 SEESDEFQESDNDRDSDMDFDMRHSNRRNPNKRKRVRKVVRQTPSKPMKPLPP-----PPTTPQH 415
            :..|:..|:..|...|       ..:...|.:...:..||       :|||..     ||:    
  Fly   500 TAYSENLQKILNKSKS-------QESTGGPEEFTNINSVV-------IKPLDKNTLNCPPS---- 546

  Fly   416 FPELKKRKEVLEPKAPQIGQIIQMPATKSVPAVFALGRG----LPSTSFLKIRPTHQSLPVKRPP 476
            |...|:::   ..:|.|...|..:.:....|..|.:..|    |.:||.:.:  :..::.:..|.
  Fly   547 FNIFKQQQ---HSQAAQSQSISAVGSGAGTPVTFTMASGNASDLATTSTVSV--SAGTICINSPM 606

  Fly   477 LPTTP----ANSNVRRMPAVQLGRIVNSPQEVKEIIINK-NMASPKGVFTNLNTLLGEDNNAATK 536
            :.|.|    .|.|:                   .::::| .||..|.......||        :.
  Fly   607 MGTRPIISIQNKNI-------------------SLVLSKTTMAQQKPKMITTTTL--------SS 644

  Fly   537 SSPVPLRHRAVMSPSTPRSSYNQQMSPIVVPVPAQ-----AHTPSKGFMPIGVDTAQSHKLPAQI 596
            .:.:.:.|..:...|..::..:............|     |:||:|..:.:..|           
  Fly   645 QAALQMHHALIQDSSADKAGSSANSGSATSGASMQLKLTTANTPTKLSVSLAPD----------- 698

  Fly   597 VIETHQSSSELAAENDKQLDLINSIVQDELLKSTLVEQPVVNADEDIPKLVKMLESTAADLDPPP 661
            |::..:..||..|:                   .||:|..|..|           ||..      
  Fly   699 VVKLEEVGSESKAK-------------------LLVKQEAVVKD-----------STGT------ 727

  Fly   662 VSLPTNIFPAPEMQGVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQFEAEVVKQVLAS 726
               ||:...|.|   :|..             |..:.|:.....:..::.....:.::......:
  Fly   728 ---PTSEERAEE---IGTP-------------EKRLNANATMTAINQVQNQSANQIQMATSTSTA 773

  Fly   727 TEPGTLDAIVSMPTSIEPVDVPQVQAHTN-----LLPNASLTEPAQSMTSLPIACSTPSRSVAAS 786
            :.|.|.:..|    :..|::..:..|..|     ||.|.|   .:.|:..:.|. |....|.:||
  Fly   774 SNPSTPNPTV----NATPMNNQRSAAEDNALLKQLLQNNS---SSHSLNQISIT-SAHVGSASAS 830

  Fly   787 TPPTSAKVVR----GYGRVIYLP-----PIEAPTTRAKRRAQFPSAPGMAATSSSDAGNLSFGES 842
            .|.::.||:.    ..|:|..|.     |:..|...|.:.|...|:.|..|||::.....|.|.|
  Fly   831 APLSARKVINVRAPSMGKVRSLEDQLARPVIPPVPTATQAAGSSSSSGSVATSTTTTTVASGGSS 895

  Fly   843 SLDASINQ---PLNTSSLSNDSQPGSGPKRPNPREPSMARRSTAPRRSKKLDASQNN-----DPD 899
            ...|:.:.   |::..:::.   ||.|      .|..:.::|..|....: :.|||.     .|.
  Fly   896 QQVATASATALPVSAVAITT---PGVG------GEAKLEQKSDQPAAIMQ-NQSQNQAPPPPPPP 950

  Fly   900 ASESQEDDDDPNKLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCV 964
            ..:.|:....|.:|     ||..::......:..                               
  Fly   951 QQQQQQQLHQPQQL-----QPSPHQVKQTVQIVS------------------------------- 979

  Fly   965 KRQEERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAPSAPRRTLPVVLTVASSPMRI 1029
            |.....|.|.....|||..|::|.:..........||.|..|....:.::..|..|.:  .|..:
  Fly   980 KETSFISGPVAAKTLVTEATSKPAELLPPPPYEMATAPISNVTISISTKQAAPKELQM--KPKAV 1042

  Fly  1030 PMAKPAKKFPTGAISHQQQQQLNFIRLGPSPGKRISETLCVVCKRPASTSSVYCGEECIRKYAQS 1094
            .|:.|.::                                              |:|.:.:.|:.
  Fly  1043 AMSLPMEQ----------------------------------------------GDESLPEQAEP 1061

  Fly  1095 AIQAH--AATKGPLPQNAG---AQSLLNNSFD------------AKKNKKK-----DLFEDVLRQ 1137
            .:.:.  |...|..|.:.|   :....||..:            .:..|:|     .|.|..::|
  Fly  1062 PLHSEQGATAAGVAPHSGGPLVSAQWTNNHLEGGVATTKIPFKPGEPQKRKLPMHPQLDEKQIQQ 1126

  Fly  1138 -------------------ADTVSKVERINVFERKSGRVITGHMAPSAHQFRKWLQENPSFEVLP 1183
                               .|.|..:..|..:.:|||  :.....|..:|.:..:|.....:...
  Fly  1127 QAEIPISTSLPTTPTGQGTPDKVQLISAIATYVKKSG--VPNEAQPIQNQSQGQVQMQAQMQATM 1189

  Fly  1184 SGTVQSADAEKRLLKGAPEAATSTSEPA--------VLGVAKKPPEGPAKL--SHPQNTTV---- 1234
            .|.:...      :.|......:...||        .|.:|..|.:...:|  :.|||.|:    
  Fly  1190 QGHLSGQ------MSGQISGHAAGQIPAQMHLQVQHQLHMAVHPQQQQQQLHQNQPQNATIPLPV 1248

  Fly  1235 --QASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRSLREQLLARIKEAQA 1297
              |.:..:.:.::...|...:::....||.|....:.||:..    |..:.|...|     .|.|
  Fly  1249 TGQGAVPIPVPTMESKAGDQRKRRKREVQKPRRTNLNAGQAG----GALKDLTGPL-----PAGA 1304

  Fly  1298 AEENSGQPT-TQW---------PTVLEVDQFVKNVELEMFNSFGRDVGAKYK--AKYRSLMFNIK 1350
            ..:.:|.|. ||:         ..:....|.|      .....|...||...  .|.|...|:..
  Fly  1305 MVQLAGMPPGTQYIQGAASGTGHVITSTGQGV------TLGGVGASTGASSSPMLKKRVRKFSKV 1363

  Fly  1351 DRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLDMIKKSELDLLACAQNYVV 1415
            :..:....||:..      .:.:|.|.|:....|     ..|.|.|                   
  Fly  1364 EEDHDAFTEKLLT------HIRQMQPLQVLEPHL-----NRNFHFL------------------- 1398

  Fly  1416 KTHKGEEVIATKVDVTLPEENVSEASSMADTKQTSLVSEPSTSTLERSTSREKAGSSKEKRHKSH 1480
                                        ..:.:||....|::.:...|.....||..|.|     
  Fly  1399 ----------------------------IGSNETSGGGSPASMSSAASAGSSSAGGGKLK----- 1430

  Fly  1481 KHHHRKRSRSRSNSRGRSVDKRHRRQHNEGGEQ--------------PG-----SGEREHRSR-- 1524
                       ..|||..:.:     |.||.|.              ||     ..||...||  
  Fly  1431 -----------GGSRGWPLSR-----HLEGLEDCDGTVLGRYGRVNLPGIPSLYDSERFGGSRGL 1479

  Fly  1525 -EKQSRERDEIVPSP---------LPKKRDEND-----------QSP----VPKKTAEKKTEASA 1564
             ...:|.|.   |||         ||....:||           ::|    |....|.|......
  Fly  1480 VGGSARTRS---PSPAESPGAEKMLPMSSIQNDFYDQEFSTHMERNPRERLVRHIGAVKDCNLET 1541

  Fly  1565 YNLVDQILESEKTVEQAANLGKPKPSPKPLPTLPSSLKAPEPMDNYSRYLHGLTTSSLWSGTLKM 1629
            .:||    |||.....|              |||...:.|.        |..|..:|...|.:..
  Fly  1542 VDLV----ESEGVAAWA--------------TLPRLTRYPG--------LILLNGNSRCHGRMSP 1580

  Fly  1630 IDLADFEIVM-YPVQGNCHQLGNLM--PSQMDV-IGRITRVNVWEYIKKLKKSPTKEVVIVNIFP 1690
            :.|.:..:.| :||.......|..:  ..||:: :|.:...|...|.:|     .:.|::.  .|
  Fly  1581 VALPEDPLTMRFPVSPLLRSCGEELRKTQQMELGMGPLGNNNNNNYQQK-----NQNVILA--LP 1638

  Fly  1691 ASPSETYKFDLFFEYLDSRQRLGVLGVDSDQIRDFYIFPLGS--------GDKLPPALQTAEPVP 1747
            ||.||                 .:.||..|.....::.|..:        |:||.......:...
  Fly  1639 ASASE-----------------NIAGVLRDLANLLHLAPALTCKIIEDKIGNKLEDQFMNQDDEK 1686

  Fly  1748 FYEEAQRPNTLL--GIIVRCLSKRP------ADAVPSTP-SVPT-PVPALSSKVAKRSRSSISYP 1802
             :.:.:||.:.:  |.:.:.|:.|.      .:.|.:|. .||. .||||..::.:.::.....|
  Fly  1687 -HVDFKRPLSQVSHGHLRKILNGRRKLCRSCGNVVHATGLRVPRHSVPALEEQLPRLAQLMDMLP 1750

  Fly  1803 AQSSP--------KRKISTHSTSSKDDEFDIDAIIKAPIAK---------------LQKTAPKVV 1844
            .:|.|        :...:....:.||.:.:..:::..|...               ...|||..:
  Fly  1751 RKSVPPPFVYFCDRACFARFKWNGKDGQAEAASLLLQPAGGSAVKSSNGDSPGSFCASSTAPAEM 1815

  Fly  1845 PQPSVPNDADEPYSPGGSDDELVPSAPQRPNDLERQVNEINKQIAA 1890
            .....|.|          :||..||.|..|.::..|...|.|..:|
  Fly  1816 VVKQEPED----------EDEKTPSVPGNPTNIPAQRKCIVKCFSA 1851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 23/145 (16%)
PHD_PHF3_like 914..963 CDD:277027 2/48 (4%)
BRK 1142..1186 CDD:197800 7/43 (16%)
TFIIS_M 1274..1396 CDD:284835 25/133 (19%)
SPOC 1623..1729 CDD:285043 21/109 (19%)
trrNP_726773.2 PHA03255 184..>320 CDD:165513 23/139 (17%)
ePHD2_KMT2C_like 1898..2002 CDD:277136
FYRN 2068..2118 CDD:283589
FYRC 2126..2215 CDD:197781
SET <2266..2431 CDD:225491
SET 2291..2413 CDD:214614
PostSET 2415..2431 CDD:214703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
11.030

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