DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pps and set3

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_594837.1 Gene:set3 / 2541899 PomBaseID:SPAC22E12.11c Length:859 Species:Schizosaccharomyces pombe


Alignment Length:937 Identity:182/937 - (19%)
Similarity:280/937 - (29%) Gaps:370/937 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   912 KLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCVKR---------- 966
            |:.|:|....::.|.|.|:.||.|.|..||.:      |..|....:.|.:|..|          
pombe     3 KIRCVCPFEDDDGFTIQCESCEVWQHAVCVNI------DANNVPEKYFCEQCQPRPIDADKAHKI 61

  Fly   967 -----QEERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAP---SAPRR--------- 1014
                 |.|..|.||..          ..|.|..|..|:..:  ..|:|   ::||:         
pombe    62 QLARLQREEEQSRILS----------RSRSSNNKRRTSFGK--NGASPTHSASPRQGNNTGANGA 114

  Fly  1015 ---------------------TLPVVLTVAS-----------SPMRIPMAKPAKK---------- 1037
                                 |||......|           :|...|:.:.:.:          
pombe   115 LFSQSTNSSNSGSYRNSVTGATLPNAHAPHSQNRRRRSNHLNNPPEAPITEASNEYVYSFHLEYV 179

  Fly  1038 ------FPTGAISHQQQQQLNFIRLGPSPGKRI--SETLCVVCKRPASTSSVYCGEECIRKYAQS 1094
                  |...|:.:.:...|          |.:  ||.|...|:....:||.:|   |.|....|
pombe   180 PLESNTFSASALEYSKNLDL----------KNLDESEVLMDGCQVVPISSSKFC---CSRFGLVS 231

  Fly  1095 AIQAHAATKGPLPQNAGAQSLLNNSFDAKKNK-------KKDLFEDVLRQADTVSKVERINV-FE 1151
            ..:....|  |:.:..|.....|......||:       |..:|.|...|....|:|..... |.
pombe   232 TCEIPPNT--PIMEVKGRVCTQNEYKSDPKNQYNILGAPKPHVFFDSNSQLVVDSRVAGSKARFA 294

  Fly  1152 RK---SGRVI------------------TGHMAPS-----------AHQFRKWL--QENPSF--- 1179
            ||   |..|:                  |.|:||.           :|.||::.  ...|||   
pombe   295 RKGCQSNSVVSSVYMNGSNSVPRFILYSTTHIAPETEIIGDWTLDISHPFRQFAPGMSRPSFNME 359

  Fly  1180 ------EVLPS----GTVQSADAEK-------RLLKGAPEAATSTSEPAVLGVAK--------KP 1219
                  |||.:    ....|.|.:.       :.:|.|..|:|:..    :.|||        ..
pombe   360 ELELLSEVLSTFLSFNECASQDKKNCVFSRVTKYIKAARRASTANR----VSVAKDRLSLTPSST 420

  Fly  1220 PEGPA---KLSHPQN-TTVQA--------------------------SHQLGISSV-----RPLA 1249
            |..|:   .|..|.| |:|.|                          :..:||..|     :|..
pombe   421 PSTPSPAESLPQPSNPTSVYAKSLKEFWLDKYRLSILQKWPAVKSLPTESVGIDVVMEPKLQPSV 485

  Fly  1250 K-----KDKEKTTPTVQAPTPNRIAAGKPEPV-------RIGIRRSLRE-------QLLARIKEA 1295
            |     ||.:...|:|:..:.||   .|...:       ::||...|..       |....:|:|
pombe   486 KEKKPTKDLQSPLPSVEEDSSNR---DKKTDIADLHTDSKVGIADVLSPISPDAALQSDGPLKKA 547

  Fly  1296 QAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEK 1360
            :..||:|..|||. |:                                   ||:.        |.
pombe   548 KEPEESSITPTTP-PS-----------------------------------FNVG--------ES 568

  Fly  1361 ICAKQVEPRQLVRMTPEQL-----ASQELAKWREEENRH----QLDMIKKSELDLLACAQNY--- 1413
            :..:...|.|..|.:|:.|     ..:.|........:|    .|..:|:..    :.|.::   
pombe   569 LSRRSASPLQHPRTSPDMLDKTSPCKRGLGTITTVHKKHGSVDHLPSVKRRR----SIANDFHGK 629

  Fly  1414 ------VVKTHKGEEVIATKVDVTLPEENVSEASSMADTKQTSLVSEPSTSTLERSTSREKAGSS 1472
                  .:...:..|...||.|  .|.:........:|:|   |..|||        |:||:||.
pombe   630 PDYNKRSLSIERKPEAFKTKGD--RPHKVHPSFHRNSDSK---LKLEPS--------SKEKSGSM 681

  Fly  1473 -----KEKRHKSHKHHHRKRSRSRSNSRGRSVDKRHRRQHNEGGEQPGSGEREHR---SREKQSR 1529
                 :..:.|||.|..:           ||.|....||         :|.|.|.   |....|.
pombe   682 FFNTLRTVKDKSHVHDTQ-----------RSSDVNFSRQ---------NGTRSHSPSVSPVGFSF 726

  Fly  1530 ERDEIVPSPLPKKRDENDQSPVPKKTAEKKTEASAY-----NLVDQILESEKTVEQAANLGKPKP 1589
            ::..:...|||       .:|.|..|:......:.:     |::|....:...:..|.|..:.:.
pombe   727 DKSPVTTPPLP-------TAPAPVITSRHALVNNQFPTNNPNILDHKANNGDDISNALNTSRSEN 784

  Fly  1590 SP----------KPLPTLPSSLKAPEP 1606
            .|          ||..|..|:|....|
pombe   785 KPNSNLVQGSVVKPSNTSASALPTSAP 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 16/52 (31%)
PHD_PHF3_like 914..963 CDD:277027 14/48 (29%)
BRK 1142..1186 CDD:197800 20/91 (22%)
TFIIS_M 1274..1396 CDD:284835 23/144 (16%)
SPOC 1623..1729 CDD:285043
set3NP_594837.1 PHD_MLL5 5..48 CDD:277025 14/48 (29%)
SET 215..343 CDD:214614 27/132 (20%)
SET 284..826 CDD:225491 122/623 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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