DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and set-26

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_001370101.1 Gene:set-26 / 178463 WormBaseID:WBGene00013106 Length:1645 Species:Caenorhabditis elegans


Alignment Length:2005 Identity:395/2005 - (19%)
Similarity:623/2005 - (31%) Gaps:752/2005 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 DEKMAMEMQAQSRKIIMQAPGSVKLINAKKRVQAIPLSPVQVKV-----QRLPVKPHQVQ----- 274
            ||::..:...|.::..:..|    ::.|::.:|.:...|...:.     ...|| .||::     
 Worm    11 DEELFEQPPLQQQQPEIAEP----IVMAQEPIQGVSEDPQASEATHEAPDNYPV-DHQMENQEFY 70

  Fly   275 QAAQLQPKVQLIRKPIHSPLPRQKPEII-----ANN----SVNARLRPTRAPVKVIAP-PVQE-- 327
            |..|:....|:.:.|:..|.....|..:     |||    :..|..||.....::.|. |.::  
 Worm    71 QEPQIPEPQQIPQIPVFQPAAYNPPNYVAPQQRANNFGEPAAAADSRPLTEEEQLAAERPTEDTV 135

  Fly   328 YIEDDDDAQSSDSAEEEN-----ADKAYDSEE------------------MSEESDEFQE----- 364
            :|:.|||....::....|     :|..||..:                  :.|:.:..::     
 Worm   136 WIDSDDDTDVEEAILRANFWLPYSDHNYDPPDPADRIILPTEGPFPCIAGLDEDCNIVKQWMPED 200

  Fly   365 ----------------------SDNDRDSDMDFDMRHSNRRNP---------------------- 385
                                  |.:.........:||:.:..|                      
 Worm   201 AVGPGSPGTQYRRNQQTGGGLPSTSVAPQQQQLPVRHNIQNRPMVAAQPFSIGGNQVEYGGIGGM 265

  Fly   386 NKRKRVRKVVRQTP----------SKPMKPLPPPPTTP--QHFPELKKRKEVLEPKAPQIGQIIQ 438
            :.|.:.|.|||..|          ..||:...||..:|  .....::::::.:..:|...|.:.|
 Worm   266 DSRMQQRGVVRDGPQYRVMNDFGNGLPMRGQLPPRNSPAANAINRVREQQQQMYHQAGARGSLQQ 330

  Fly   439 MPATKSVPAVFALGRGLPSTSFLKIRPTHQSLPVKRPPLPTTPANSNVRRMPAVQLGRIVNSPQE 503
                 .|||..|              ||..|.......:|...||. :||:|          ||.
 Worm   331 -----RVPAPAA--------------PTPGSYQHIVNAVPVGGANP-MRRVP----------PQA 365

  Fly   504 VKEII---INKNMASPKGVFTNLNTLLGEDNNAATKSSPVPLR------HRAVMSPSTPRSSYNQ 559
            ...:|   .|.|.|.|..|...::|...|...|...::| |.|      ||............|:
 Worm   366 RPGMIGGAANNNRARPIHVTRPMDTQEFEHPVAPAAAAP-PRRVVDVAPHRMTPEQRQELQQMNR 429

  Fly   560 QMSPIVVPVPAQAHTPSKGFMPIGVDTAQSHKLPAQIVIETHQSSSELAAENDKQLDLINSIVQD 624
            |.:....|..|...:..|                  |||:....:|...|...       |:.|:
 Worm   430 QRAAPQFPAAAAQRSAEK------------------IVIQQRPGASSSRAPRP-------SMAQE 469

  Fly   625 ELLKS---TLVEQ-------PVVNA-----------DEDIPKLVKMLESTAADLDPPPVSLPTNI 668
            :||:|   .|.|:       ||:..           ...|||....|.:...:.|||..|     
 Worm   470 DLLRSPTRRLSERVPQEHQTPVLEPRRFQVKVTDTYSTPIPKASDQLPAQLTEEDPPEES----- 529

  Fly   669 FPAPEMQGVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQFEAEVVKQVLASTEPGTLD 733
                       ||||.|.::.|.|.||.                       .|.:|..|.|..:.
 Worm   530 -----------AAAAAPEDVPDAAPEDP-----------------------PKGILKPTPPHRMT 560

  Fly   734 AIVSMPTSIEPVDVPQVQAHTNLLPNASLT----EPAQSMTSLPIACSTPSRSVAASTPPTSAKV 794
            .             .:..||.     |.||    :|..|.:.||...:.|.    ...||....|
 Worm   561 Q-------------EEKNAHF-----ARLTTDKEKPTSSASILPQDAAPPH----VPPPPPPPLV 603

  Fly   795 VRGYGRVIYLPPIEAPTTRAKRRAQFPSAPGMAATS------SSDAGNLSF------GESSLDAS 847
            :|         |.....|.|..::.|.|.|....|.      |..|..|.|      |:|...|:
 Worm   604 LR---------PHHQDETLAMVQSVFESKPRQPDTPKDKEAISKIADLLRFSADEFTGQSGSSAA 659

  Fly   848 INQ---------------------------PLNT----SSLSNDSQPGSGPKRPNP--------- 872
            ..|                           |::.    ||...|:..|:.|.:..|         
 Worm   660 ARQRTVSGSAARAQTYQMHHQQQQQHHHQMPMDQRKRHSSGRYDALMGAMPLQQQPPPPPPSQFQ 724

  Fly   873 ----------------REPSMA---RRS----TAPRRSKKLDASQNNDPDA----SESQEDDDDP 910
                            |.||:|   :||    |.|.|::.:..|..|..:|    |||:..|:..
 Worm   725 HTDSIAHRPRGRPKGTRHPSVAVQPQRSGGARTLPPRAQTVAMSARNGANAKNSDSESEGIDEAA 789

  Fly   911 NKLW---CICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCV-------K 965
            .:.|   |.|...|.:...|.|:.|:.|.|..|:|:|....|.      .:||..|:       |
 Worm   790 EESWTMRCHCGMDHGDGDTIECEGCKTWQHMACMGLTLKSNTS------KYKCEMCLPRRLPVSK 848

  Fly   966 RQEERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAPSAPRRTLPVVLTVASSPMRIP 1030
            .:..|.|.||.:.|  |...:.::|.||      ..|..|.:.||..|::.|:.|          
 Worm   849 AEAAREQERILNRL--RAAAKKQKRKSE------PVEQKQKSQPSTSRKSAPMAL---------- 895

  Fly  1031 MAKPAKKFPTGAISHQQQQQLNFIRLGPSPGK-RISETLCVVCKRPASTSSVYCGEECIRKYAQS 1094
                             |||         |.: |:::                     :..|:: 
 Worm   896 -----------------QQQ---------PAEPRVAQ---------------------LNDYSK- 912

  Fly  1095 AIQAHAATKGPLPQNAGAQSLLNNSFDAKKNKKKDLFEDVLRQADTVSKVE-RINVFERKSGRVI 1158
              ||.|...| :.|.|||.:||..|...||.::. ..|:.:....|...|: |..:.|      :
 Worm   913 --QASALLFG-MEQTAGADTLLAESRLHKKARRM-FVEEAVEALVTTDLVQIRQVILE------V 967

  Fly  1159 TGHMAPSAHQFRKWLQENPSFEVLPSG--TVQSADAEKRLLKG-APEAATSTSEPAVLGVAKKPP 1220
            .||::.|....|:           |.|  .:...|.   |:|| |.|......|...:...:|..
 Worm   968 NGHVSMSNEVKRQ-----------PGGGNCIFMYDG---LMKGTAGEDMGDGQELVCIDTKRKGN 1018

  Fly  1221 EGP-AKLSHPQNTTVQASHQLGISS---VRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIR 1281
            :.. .:.|...|..::  |.||.::   :..:|.||..:.|                 .|.:...
 Worm  1019 DTKFTRRSCVPNCVLK--HVLGSNATLGIMIVATKDITRNT-----------------EVTLPFD 1064

  Fly  1282 RSLREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLM 1346
            ...||      .|.:                ||..:.:|.::...|.|..|...|:   ::|::.
 Worm  1065 ADWRE------SEVE----------------LECAEHMKELQACPFESERRRFAAE---RHRAMD 1104

  Fly  1347 FNIK--------DRKNRTLFEKI------CAKQVEPRQLVRMTPEQLASQE-LAKWREEENRHQL 1396
            ...:        |.:.|.|.|::      ..||::..:..|:..|:.|.:| .||.|||....  
 Worm  1105 HKKREAEEARRADEERRRLEEEVRRERAAKTKQMDEAEKARLEAEKAAEKEKKAKEREEAKER-- 1167

  Fly  1397 DMIKKSELDLLACA----QNYVV-----KTHKGEEVIATKVDV---------------------- 1430
               ||.|::..|.|    .|.:.     :..:.||:...:.:.                      
 Worm  1168 ---KKMEVEASAAAAPESSNSITAREERRIQQAEEMFRRQEEEGKRKEARRRSKSVTPGVLEAAG 1229

  Fly  1431 TLPEENVSEA-------SSMADTKQTSLVSEPSTSTLERSTSREKAGSSKEKRH----KSHKHHH 1484
            |...|:..||       |..|..:..|..::||||:.  :|..|....:|..|.    ||.....
 Worm  1230 TAAREDAPEASIPAPAPSPPASRRSVSRTTQPSTSSF--ATPTEPPAKNKRMRSVVPPKSEPASS 1292

  Fly  1485 RKRSRSRSNSRGR----SVDKRHRRQHNEGGEQPGSG---------------EREHRSREKQSRE 1530
            .||.|:.:.:..:    |.|.| :|:.:..|:.|.:.               |:|.|.:.:.|..
 Worm  1293 AKRVRATTVATPKDTTASNDSR-KRKSSATGKTPVAKRSKNVVPTSFGLALIEKELREQARDSTV 1356

  Fly  1531 RDEIVPSPLPKKRDEN---DQSP-----------------------VPKKTAEK---------KT 1560
            .:.|:|..:.|::...   .|||                       ..||..||         :.
 Worm  1357 LEMILPDYIMKEKRSGLLAGQSPDFSEVRAQIEEENRMKERFTKREAKKKAVEKAKEKEKKEHRK 1421

  Fly  1561 EASAYNLVDQILESEKTVEQAANLGKPKP-SPKPLPTLPSSLKAP----EPMDNYSRYLHGLTTS 1620
            |....|......:|||.||:|....:.|| ||:..|..|::.|.|    |.:|...|  ....:|
 Worm  1422 EPKKANEPGPAPKSEKAVEKAVEKVEKKPKSPQKPPAKPTAQKPPLKKTEEVDGIER--EASESS 1484

  Fly  1621 SLWSGTLKMIDLADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLKKSPTKEVVI 1685
            |..|                          ::.|.:                   ||:|.|..  
 Worm  1485 SKES--------------------------SVAPEE-------------------KKNPKKIT-- 1502

  Fly  1686 VNIFPASPSETYKFDLFFEYLDSRQRLGVLGVDSDQIRDFYIFPLGSGDKLPPALQTAEPVPFYE 1750
                            |.||...|.:....|..|                .|||:.....:|..|
 Worm  1503 ----------------FAEYNSRRSQKREAGECS----------------TPPAVTRRGFIPSTE 1535

  Fly  1751 EAQRPNTLLGIIVRCLSKRPADAVPST----------PSV-----PTPVPALSSKVAKRSRSSIS 1800
            .....|..|..|       |.|..||:          |||     ||.|...|.....|:|.:.|
 Worm  1536 GEDLVNVELSAI-------PLDDHPSSSNTAPTTTIAPSVGGAPKPTSVVVKSPSTRSRTRGAAS 1593

  Fly  1801 YPAQSSPKRKISTHSTSSKDDEFDI-DAIIKAPIAKLQKTAPKVVPQPSVPNDAD 1854
            .....:|    :.||.|.:|..|.: .:.:.||           .|.|..|..|:
 Worm  1594 ESVDDAP----AEHSMSLQDRVFSMFGSTVDAP-----------APPPPPPASAE 1633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 48/226 (21%)
PHD_PHF3_like 914..963 CDD:277027 15/51 (29%)
BRK 1142..1186 CDD:197800 9/46 (20%)
TFIIS_M 1274..1396 CDD:284835 27/136 (20%)
SPOC 1623..1729 CDD:285043 12/105 (11%)
set-26NP_001370101.1 PRK03427 <9..>135 CDD:235124 25/128 (20%)
PHD_Bye1p_SIZ1_like 796..839 CDD:277045 14/48 (29%)
SET_SETD5-like 935..1067 CDD:380927 31/171 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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