DRSC/TRiP Functional Genomics Resources

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Protein Alignment pps and set-16

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_499819.3 Gene:set-16 / 176802 WormBaseID:WBGene00011729 Length:2475 Species:Caenorhabditis elegans


Alignment Length:1761 Identity:325/1761 - (18%)
Similarity:551/1761 - (31%) Gaps:628/1761 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DQEEDERLEELANFMETA---TDSELDSDNGSQ-SGGDNASEMDEHDEENHNTGDDNNSD----- 120
            |.:.||..:||.|.:..|   |:.:.|:..|.: |.|..:..:|:....:...|...:.|     
 Worm   837 DFDVDEENDELENSLLGAPGNTEMKEDAAEGIEGSYGPTSFNLDQRPSTSSAGGSLGSQDPFHPG 901

  Fly   121 --STETEADAPRTRKRVGRKPKAIKKRKR-----RKPKERPQIVGLRV----------------E 162
              .......||..|..:.|........:|     |..::.|.  ||:.                :
 Worm   902 MNPANFAQHAPGVRNAIARSGSQTDNSERYQFSARWEEDEPN--GLQATTAAVLYSNEKHGYLRQ 964

  Fly   163 QFYADNTADMVVKNALKLAGVSVYKRTAETDALMEVIRNDHNYTPFTSPEQLKNHKRDEKMAMEM 227
            ||  .|..|. ||...||      .||...:..::.:                |..||.:.....
 Worm   965 QF--PNWVDR-VKQIQKL------WRTLNHEVRLDYV----------------NRARDNRTRSGN 1004

  Fly   228 QAQSRKIIMQAPGSVKLINAKKRVQAIP-----------LSPVQVKV-QRLPVKPHQVQQAAQLQ 280
            :.:.|:..:|:..|........:|.|.|           :.|.||.: ..||:..:||.|..:  
 Worm  1005 RPRPRRTNVQSTDSPPPPQMGFKVPANPSSNMMGSSEQSMQPKQVFITHHLPMDVYQVYQDLK-- 1067

  Fly   281 PKVQLIRKPIHSPLPRQKPEIIANNSVNARLRPTRAPVKVIAPPVQEYIE-----DDDDAQSSDS 340
             :|:..|:.:             |.|:..:|...|...|.:|...::.::     .|.|.::.|.
 Worm  1068 -RVKFDRERL-------------NGSLEEQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDL 1118

  Fly   341 AEEENADKAYDSEEMSEESDEFQESDND---RDSDM-DFDMRHSNRRNPNKRKR----------- 390
            .|.:....|..:|::.....|.:....|   .:|:: ||.|:|...||.::.||           
 Worm  1119 NESDQQTLATLTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGILRNEHEVKREDVQLSAIRDQ 1183

  Fly   391 ---------------------VRKVVRQTP----SKP----------------MKPLPP------ 408
                                 |...|...|    |.|                |:..||      
 Worm  1184 QYAAHADEMLAQQAQNQGLGQVHPPVLVAPQAAISLPMLNQQQQHHQRMMQMQMRGGPPGQFMMR 1248

  Fly   409 --PPTTPQ---HFPELKKR--KEVLEPKAPQIGQI----IQMPATKSV----------------- 445
              ||..||   |..|:.||  .:......|.:|.|    |..|..:.|                 
 Worm  1249 AQPPQQPQINMHNHEIAKRMLMQQFRNAHPVMGGIRHDEITDPIMRDVYDCLEAIVFDVHTVAER 1313

  Fly   446 PAVFALGRGLPSTSFLKIRPTH--QSLPVKRPPLPTTPANSNVRRMPAVQLGRIVNSPQEVKEII 508
            .|:.|.|:..|        |.|  |.:..:.|..|..|......:.|.:|..||...|..|:  :
 Worm  1314 EAMQAAGQQPP--------PPHIMQRMMQQHPGGPGGPRLIMPGQFPQLQGRRIPQQPPPVQ--L 1368

  Fly   509 INKNMASPKGVFTNLNTLLGEDNNAATKSS-PV---------PLRHRAVMSPSTPRSSYNQQMSP 563
            ...::..||   |......|..|.....|| |.         .:|.|..:.|..|:    :|..|
 Worm  1369 PQVDVDPPK---TAAKRKKGGGNPKKNASSYPAAGEYDAWIEQMRMRFRLCPDIPK----KQKEP 1426

  Fly   564 IVVPVPAQAHTPSKGFMPIGV-DTA-QSHKLPAQIVIE---------THQSSSELAAENDKQLDL 617
                   :.:.|...|:..|: |.| ::.|....:|.|         |....:|...|.......
 Worm  1427 -------RLNRPGCEFVSHGLTDMAVRATKKRTPLVGEFGAMRVKRGTRLFGNEERGEKSIMFQD 1484

  Fly   618 INSI-VQDELLKSTLVEQPVVNADEDIPKLVKMLESTAADLDPPPVSL----------------- 664
            :|.. |:.::....|...|:...::|:     ..:.....:|.|..:|                 
 Worm  1485 LNLYQVEPQIRLFALYNNPLPTMEDDV-----FRDEEDQIIDKPTSALQKLLNKKRGASGAMDHI 1544

  Fly   665 --------PTNIFPAPEMQGVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQFEAEVVK 721
                    .|||.|||| :|:                       |.::|    |.:::...|:|.
 Worm  1545 RSRARYMEETNIPPAPE-RGM-----------------------FYENV----EAEEEVTVELVF 1581

  Fly   722 QVLASTEPGTLDAIVSMPTSIEPVDV-----PQVQAHTNLLPNASLTEPAQSMTSLPIACSTPSR 781
            .....||..::|         |..||     .|::   :||  |...|.|.||            
 Worm  1582 NTCDITEESSVD---------EKKDVCGRLHEQIR---DLL--AIKDEVAWSM------------ 1620

  Fly   782 SVAASTPPTSAKVVRGYGRVIYLPPIEAPTTRAKRRAQFPSAPGMAATSSSDAGNLSFGESSLDA 846
               ..|||                  |:|.:|:...                           :|
 Worm  1621 ---EDTPP------------------ESPVSRSPEP---------------------------EA 1637

  Fly   847 SINQPLNTSSLSNDSQPGSGPKRPNPREPSMARRSTAPRRSKKLDASQNNDPDASESQEDDDDPN 911
            ::.....|||.|              |.|     |.|..|..|.:..:...|.|.|.:.:..:|:
 Worm  1638 TVGAVQQTSSTS--------------RAP-----SEATEREIKREVEEEAAPVAPEIKREIVEPS 1683

  Fly   912 KLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCVKRQEERSQPRIT 976
                   |..|:.                                  :|..|.|..|..|...|.
 Worm  1684 -------QSQNSS----------------------------------QCKNCQKALESHSSTSIV 1707

  Fly   977 DMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAPSAP--------RRTLPVVLTVAS--------S 1025
            .:...:....|     ...|:||.|..|....|.||        .:|...:.:..|        |
 Worm  1708 TVKAEKLNLAP-----TGSVVTTRAAPVPPGVPGAPGAPIAPSEEKTKEELASFCSKKCYYELAS 1767

  Fly  1026 PMRIPMAK----PAKKFPTGAISHQQQQQL--NFIRL---GPSPGKRIS---ETLCVVCKRPAST 1078
            ..|.|:.:    .|::..:..:.::.:|.|  |.::.   |..|..:::   :|.|::.:.....
 Worm  1768 ATRAPLTEEEVAAAEQHVSEEVYNKLKQVLTENIVKAVSQGKKPDPQLTSPRDTRCMMDEGRREN 1832

  Fly  1079 SSVYCGEECIRKYAQSAIQAHAATKGPLPQNAGAQSLLNNSFDAKKNKKK--DLFEDVLRQ-ADT 1140
            .::......|     .|::|        |:.|.:|.....:.|.|...|.  |.|.::.:| |..
 Worm  1833 VTIVPVASLI-----GAVEA--------PKEAPSQRAAEAAEDWKAYTKSIWDSFVNIQQQHAHH 1884

  Fly  1141 V--SKV----------ERINVF--------ERKSGRVITGHMAPSAHQFRKWLQENP---SFEVL 1182
            :  .|:          :||.||        ..:.||:|      |..:| .|:..|.   |.||.
 Worm  1885 ILSPKIGVPHPPYHLDKRICVFCGGIGDGETTRCGRLI------SLTEF-YWVHVNCALWSAEVF 1942

  Fly  1183 PSGTVQSADAEKRLLKGAPEAATSTSEPAVLGVAKKPPEGPAKLSHPQNTTVQ-----ASHQLG- 1241
            .:.|....:.::.:|:.|..|......|           |.:...|..|..|.     |....| 
 Worm  1943 ENQTGGLTNVDRAVLRAAQTACDHCKRP-----------GASVKCHKMNCGVNYHVLCAMQNNGF 1996

  Fly  1242 ISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPV-RIGIRRSLREQLLARIKEAQAAEENSGQP 1305
            ....|....|..||.:        |:...|:.:.: ||.::|. ...:|.|:.|           
 Worm  1997 FIKDRTFICKQHEKVS--------NQAIVGRLDALRRIYVKRD-ENTMLTRLFE----------- 2041

  Fly  1306 TTQWPTV-LEVDQF-------VKNVELEMFNSFGRDVGAKY---------KAKYRSLMFN--IKD 1351
            .|..||: :.:..|       :...:|:.|::........|         |:....:||.  |:|
 Worm  2042 LTDGPTLCMRLGAFTFYKIGSITPKQLKRFHTKDYIFPNNYRITRLFWSPKSHRERMMFECIIED 2106

  Fly  1352 RKNRTLF-------EKICAKQVEPR---QLVRMTPEQLASQE----------------------- 1383
            |.|:.:|       ..||.|.|...   |.:.....||..|:                       
 Worm  2107 RNNQPIFVVKSLEDPTICYKAVSASKAWQPIYEKVHQLREQQQGDSLKFFGSQICGETLFGLNEN 2171

  Fly  1384 -LAKWREE----------ENRHQLDMIKKSEL--DLLACA----QNYVVKTH---KGEEVIATKV 1428
             :.|..|.          ::|||...:.:..|  :|:.||    :|..:..|   |.:.:..|  
 Worm  2172 AITKITESLPGFDTIFTYQHRHQNSPVLELPLAENLMGCARAEPRNRTIGQHFRTKPQPMGGT-- 2234

  Fly  1429 DVTLPEENVSEASSMADTKQTSLVSEPSTSTLERSTSREKA---GSSKEKRHKSHKHHHRKRSRS 1490
                 ..::..||.:  :.|.::::..|:|..|...||:.|   .|:...|.:..:.::.:.:.:
 Worm  2235 -----HHHIGSASGL--SSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAA 2292

  Fly  1491 RSNSRG 1496
            |:.:.|
 Worm  2293 RARAFG 2298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 19/137 (14%)
PHD_PHF3_like 914..963 CDD:277027 3/48 (6%)
BRK 1142..1186 CDD:197800 15/64 (23%)
TFIIS_M 1274..1396 CDD:284835 33/185 (18%)
SPOC 1623..1729 CDD:285043
set-16NP_499819.3 PHD_SF 42..84 CDD:276966
PHD4_KMT2C_like 427..477 CDD:276987
PHD5_KMT2C_like 479..524 CDD:276988
PHD6_KMT2C_like 554..604 CDD:276989
DUF1351 1060..>1163 CDD:284492 24/118 (20%)
ePHD2_KMT2C_like 1904..2008 CDD:277136 25/121 (21%)
FYRN 2055..2104 CDD:283589 7/48 (15%)
FYRC 2112..2199 CDD:197781 14/86 (16%)
SET 2333..2457 CDD:214614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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