DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pps and met-1

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:NP_491340.2 Gene:met-1 / 172026 WormBaseID:WBGene00016603 Length:1604 Species:Caenorhabditis elegans


Alignment Length:1962 Identity:356/1962 - (18%)
Similarity:623/1962 - (31%) Gaps:641/1962 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 KLINAKKRVQAIPLSPVQVKVQRLPVKPHQVQQAAQLQPKVQLIRKPIHSPLPRQKPEIIANNSV 307
            |::..|||.:       .|:.:|        :.||.:|....:.......|.| |.|        
 Worm     5 KVVLPKKRTE-------MVQTRR--------KTAAAVQDGGAVKENKAKPPAP-QTP-------- 45

  Fly   308 NARLRPTRAP-VKVIA-----PPVQEYIEDDD---DAQSSDSAEEENADKAYDS--EEMSEESDE 361
            ..|.:..|.| :|..|     |.....:.||.   :::|.||.....||...:.  ||:.:.||.
 Worm    46 TKRAKRGRPPKIKTDANTLNTPSTSSNLVDDKLLIESESQDSILTNEADSFLEKEVEEIEDSSDI 110

  Fly   362 FQESDNDRDSDMDFDMRHSNRRNPNKRKRVRKVVRQTPSKPM---------KPLPPPPTTPQHFP 417
            ..:..|..:.......|.|:.|...|.....|.|      |:         |.:...||:|.|  
 Worm   111 LPDKINSPEKPSVLVKRRSSTRLKVKTDEDEKDV------PVNIEVAVLEEKSIQIEPTSPAH-- 167

  Fly   418 ELKKRKEVLEPKAPQIGQIIQMPATKSVPAVFALGRGLPSTSFLKIRPTHQSLPVKRPPLPTTPA 482
                      |:.||       |:|.|:|.|               .|....:....|.....|.
 Worm   168 ----------PEDPQ-------PSTSSLPLV---------------EPIEDIVEPNEPTSSADPP 200

  Fly   483 NSNVRRMPAVQLGRIVNSPQEVK--EIIINKNMASPKGVFTNLNTLLGEDNNAATKSSPVPLRHR 545
            .||::             .:::|  |.:|.|..:.........|:..|.|:::            
 Worm   201 VSNIK-------------DEDIKEEEPLIKKPASDESESMDIANSESGNDSDS------------ 240

  Fly   546 AVMSPSTPRSSYNQQMSPIVVPVPAQAHTPSKGFMPIGVDTAQSHKLPAQIVIETHQSSSELAAE 610
               |.:.||:     :....:|:|   .||...|...|           :|.::..|.:|:.:.|
 Worm   241 ---SEADPRT-----IPSFSIPLP---DTPPPNFAKRG-----------EIHVDVDQKNSKQSGE 283

  Fly   611 NDKQLDLINSIVQDELLKSTLVEQPVVNADEDIPKLVKMLESTAADLDPPPVSLPTNIFPAPEMQ 675
            :....:..........|.|..:.:|.::...  |........:.:.|.|||..      |||..:
 Worm   284 SQSPWERAREKSASNPLSSPTMSRPRIHFLH--PAYQSFTNDSVSPLPPPPPE------PAPARE 340

  Fly   676 GVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQFEAEVVKQVLASTEPGTLDAIVSMPT 740
            .|.|..   |.....|..                   |.....::| ..|..:|.:.....|:.:
 Worm   341 KVENGG---PTTFKMTFK-------------------KAANIPILK-TSAFEQPSSPPPSSSVSS 382

  Fly   741 SIEPVDVPQVQAHTNLLPNASLTEPAQSMTSLPIACSTPSRSVAASTPPTSAKVVRGYGRVIYLP 805
            ||   .:.:|.:.|::   ||.:.||:..::..:..|.       ..||.         :::.||
 Worm   383 SI---SLSEVNSSTSI---ASESSPAKRSSNFDLTASN-------ELPPP---------QMVELP 425

  Fly   806 PI---EAPTTRAKRRAQFPSA------------PGMAATSSSDAGNLS------FGESSLDA--- 846
            .:   ..|.  |.|.|:..||            |. :||...||..|:      ..||.:.|   
 Worm   426 KLSFFNMPP--AVRSAEDDSAMTSEEPILLLRSPN-SATPDDDALFLTTPPPPKMTESEIQALKV 487

  Fly   847 ---SINQPLNTSSLSNDSQPGSGPKRPNPREPSMARRSTAPRRSKKLDASQNNDPDASESQEDDD 908
               .:||.:   :...||:  ...:....|:....||....|||:|.|:.:|   |....|.:||
 Worm   488 ATEKVNQVI---ARREDSE--KDVRHREDRDDYDRRRDDRDRRSRKTDSERN---DQRGRQREDD 544

  Fly   909 DPNKLWCICRQPHNNRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCVKRQEERSQP 973
            :.       |.....|                 .|||....:.|...:.       |:::|..:.
 Worm   545 ER-------RARERER-----------------EVTKRHDREREEMRLQ-------KQKDEERRK 578

  Fly   974 RITDMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAPSAPRRTLPVVLTVASSPMRIP-------- 1030
            :..:..:.:...:.:|:..|.|:.....:|.:                   ..|:||        
 Worm   579 KDEEERIQKENDEKKQKEDEAKMEEEKKKIKE-------------------EEMKIPEFELISES 624

  Fly  1031 --MAKPAKKFPTGAISHQQQQQLNFIRLGPSPGKRISETLCV---VCKRPASTSSVYCGEECIRK 1090
              :.:.|.|..|.:::.:..:          .|...|:..||   :.....|:..|.|..:...|
 Worm   625 KYLTRNANKKKTESLTCECHR----------TGGNCSDNTCVNRAMLTECPSSCQVKCKNQRFAK 679

  Fly  1091 YAQSAIQA-HAAT-KGPLPQNAGAQSLLNNSFDAKKNKKKDLFEDVLRQADTVSKVERINVFERK 1153
            ...:|::| |..| ||     .|.:        |.|:.||..|  ::.....|  |||.:..:||
 Worm   680 KKYAAVEAFHTGTAKG-----CGLR--------AVKDIKKGRF--IIEYIGEV--VERDDYEKRK 727

  Fly  1154 SGRVITGHMAPSAHQF---------------------------------RKWLQENPSFEVLPSG 1185
                 |.:.|...|:.                                 .||     |....|..
 Worm   728 -----TKYAADKKHKHHYLCDTGVYTIDATVYGNPSRFVNHSCDPNAICEKW-----SVPRTPGD 782

  Fly  1186 TVQSADAEKRLLKGAPEAATS--------TSEPAVLG-------VAKKPPEGPAKLSHPQNTTVQ 1235
            ..:.....||.:|...|....        .::....|       :.:||.|    .|..::..:.
 Worm   783 VNRVGFFSKRFIKAGEEITFDYQFVNYGRDAQQCFCGSASCSGWIGQKPEE----FSSDEDDDIV 843

  Fly  1236 ASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRSLREQLLARIKEAQAAEE 1300
            .:..:.:.      ::::||......        .|..|  |..:.:.:.:.|:.|.|:......
 Worm   844 TTRHINMD------EEEEEKLEGLDH--------LGNHE--RNEVIKDMLDDLVIRNKKHARKVI 892

  Fly  1301 NSGQPTTQWPTVLEVDQ--FVKNVELEMFNSFGRDVGAKYKAKYRS----------LMFNIKDRK 1353
            ......|.:...::|.|  |..:..:.:...:.::..|...|::.|          |:..|....
 Worm   893 TIASAMTDYSQRVDVIQEIFSSDTSVTVQKFYAKEGMATLMAEWLSEDDYSLDNLKLVQAILKAL 957

  Fly  1354 NRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLDMIKKSELDLLACAQNYVVKTH 1418
            :..||:. |||.           ::|.....::|...:....:| |:.....|:||.:: .|:.:
 Worm   958 HTELFDS-CAKN-----------DRLLRDSTSRWVNAKMDEYVD-IQVIADSLIACVED-PVQEY 1008

  Fly  1419 KGEEVIATKVDVTLPEENVSEASSMA------------DTKQTSLVSEPSTSTL-----ERSTSR 1466
            |....:..|..|    ||.:.|..||            ..|....:.:|....:     :.:||.
 Worm  1009 KDVCKVIEKGLV----ENFTRAKEMAYRLNQYWFNRSVSFKIPKKIRDPVPKDVPVRQEDATTSS 1069

  Fly  1467 EKAGSSKEKRHKSHKHHHRKRSRSRSNSRGRSVDKRHRRQHNEGGE------------------- 1512
            :...:|......:|:||    |.|.|||..:..:..|.|..|.|.:                   
 Worm  1070 QSHDNSSRTVSPNHRHH----SSSYSNSCYQEREPSHIRFFNNGNDVHQYRFGGYHGNNYNDNYF 1130

  Fly  1513 --QPGSGEREHRSR--EKQSRERDEIVPSPLPKKR---DEND-----QSPVPKKTAEKKTEASAY 1565
              :|.......|.|  .::||.|...| ||...||   ||:|     :||:    .::.|...  
 Worm  1131 SRRPNKDSYRDRRRFNGRRSRSRSRSV-SPQNYKRRKLDEHDNNHRQRSPI----RDRHTSPG-- 1188

  Fly  1566 NLVDQILESEKTVEQAANLGKPKPSPKPLPTLPSSLKAPEPMDNYSRYLHGLTTSSLWSGTLKMI 1630
                    .|||                    |||..:.|  .||.|                  
 Worm  1189 --------GEKT--------------------PSSNNSGE--RNYKR------------------ 1205

  Fly  1631 DLADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLKKSPTKEVVIVNIFPASPSE 1695
                                      :|:.|  .|:       |..|...:.........|.|||
 Worm  1206 --------------------------LDIRG--ARI-------KTIKEDLEAAAAAAAAAAVPSE 1235

  Fly  1696 TYKFDLFFEYLDSRQRLGVL-GVDS----DQIRDFYIFPLGSGDKLPPALQTAEPVPFYEEAQRP 1755
            ...:.  .|:....|.:..: |.:|    |.:...|::|.......||| ...:|:....:...|
 Worm  1236 VQAYP--HEHTAVHQSVYQMPGYESYGVYDPVNGVYMYPHPGAGYYPPA-YPQQPIMLTMDTLPP 1297

  Fly  1756 NTLLGII-----VRCLSKRPADAVPSTPSVPTPVPALSSKVAKRSRSSISYPA------QSSPKR 1809
            |..||.:     :..|::|  ||:     |...:..:..::.:::....:..|      :...||
 Worm  1298 NDRLGELYEKASIEQLAQR--DAI-----VRQELELIRIQIERKTAQKEAIKAACRRANEEEAKR 1355

  Fly  1810 KISTHST--------SSKDDEFDIDAIIKAPIAKLQKTAPKVVP---QPSVPNDADEPYSPGGSD 1863
            :.:...|        |...:.:..:.|.|    :.|.|||..|.   :|:.          |.|.
 Worm  1356 QEALAKTKYVWAIAKSEAGETYYYNKITK----ETQWTAPTPVQGLLEPAC----------GASP 1406

  Fly  1864 DELVPSAPQRPNDLERQVNEINKQIAAQQMEIAGLLKVEPTGSASSSNVLAAISIPANLSKILAS 1928
            |..|..|.:...: |:|...:.|....:: |:     :|| ||.|.:..    ..|..:..::..
 Worm  1407 DTTVVIADEITEE-EQQAEVLEKPRVVKE-EV-----IEP-GSQSETQK----ESPEKVRVVVPK 1459

  Fly  1929 IK-DKTNLPSSADD--GDEEYNPEDDITATSSFASKKPRSKGRLAHLSEAELLSMVPDNLAGVIP 1990
            :: :::..|.|:.|  .|.|.:.|.|   ......::..||.|.::.......|.|.:.      
 Worm  1460 VEVERSPSPKSSRDREKDREKSREKD---RERDRDRREGSKHRDSYHGHRNGSSSVSER------ 1515

  Fly  1991 RSSRTRHQLAQS 2002
            |....:|:|.:|
 Worm  1516 RMREFKHELERS 1527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 31/149 (21%)
PHD_PHF3_like 914..963 CDD:277027 6/48 (13%)
BRK 1142..1186 CDD:197800 12/76 (16%)
TFIIS_M 1274..1396 CDD:284835 21/133 (16%)
SPOC 1623..1729 CDD:285043 15/110 (14%)
met-1NP_491340.2 PHA03283 <219..308 CDD:223032 18/122 (15%)
AWS 637..682 CDD:197795 8/54 (15%)
SET 694..810 CDD:214614 25/142 (18%)
tolA_full <1300..>1375 CDD:274303 12/81 (15%)
WW 1366..1393 CDD:238122 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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