DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pps and si:ch73-181d5.4

DIOPT Version :9

Sequence 1:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster
Sequence 2:XP_003201203.2 Gene:si:ch73-181d5.4 / 100538306 ZFINID:ZDB-GENE-100922-118 Length:2142 Species:Danio rerio


Alignment Length:1479 Identity:317/1479 - (21%)
Similarity:502/1479 - (33%) Gaps:440/1479 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   781 RSVAASTPPTSAK-VVRGYGRVIYLPPIEAPTTRAKRRAQFPSAPGMAATSSSDAGNLSFGE--- 841
            |:..|....|:|| ..||.|||.    :.|..:.::|     :..|..:..:.|:.:|:..|   
Zfish    66 RAADAGMGLTAAKRGRRGRGRVW----VHADESSSER-----NTGGATSDRAEDSDDLNLQEMRR 121

  Fly   842 --------SSLDASINQPLNTS---SLSNDSQPGS-GPKRP--NPREPSMARRSTAPRRSKKLDA 892
                    .|.|...|..|...   ..|:|::..: |.|:.  ..||.:.........|:::|  
Zfish   122 RALARRMRESTDGERNDGLGEQEGVEQSDDTESAAEGEKQGLFTDREAADTLSFAGDERNERL-- 184

  Fly   893 SQNNDPDASESQE--------DDDDPNKLWCICRQ-PHNNRFMICCDLCEDWFHGTCVGVTKAMG 948
             ||:    ||.||        ::|:.:.:...|.| ..:||..|.|..|..:.|..|||:.:.. 
Zfish   185 -QNH----SEHQEEICISDKHEEDNQDAVCGTCGQRDDSNRLTISCKSCGAFRHVDCVGIFETW- 243

  Fly   949 TDMENKGIDWKCPKCVKRQEERSQPRITDMLVTRPTTQPEQRPSETKVLTTTAEIVQVAAPSAPR 1013
                 |..::.||.|.:.:|...:.:.||                                    
Zfish   244 -----KNEEYMCPPCTENRELTCRNQKTD------------------------------------ 267

  Fly  1014 RTLPVVLTVASSPMRIPMAKPAKKFPTGAISHQQQQQL-----NFIRLGP---SPGKRISETLCV 1070
                               .|..|....:|:....||:     |.:.:.|   .||         
Zfish   268 -------------------DPCLKQEISSINMVDVQQMIKVEQNVVEVSPKCIGPG--------- 304

  Fly  1071 VCKRPASTSSVYCGEECIRKYAQSAIQAHAATKGPLPQNAGA---------QSLLNNSFDAKKNK 1126
             |...|...|||||..||.::|..||:   ....|.|:...|         :|.|...|..|.||
Zfish   305 -CSSDALPESVYCGHRCIVQHAAVAIK---TLSEPKPEVKSAVVPSLKSEKRSFLAKLFKVKVNK 365

  Fly  1127 KKDLFEDVLRQADTVSKVERINVFERKSGRVITGHMAPSAHQFRKWLQENPSFEVLPSGTVQSAD 1191
            ..       .:.:...|.|     |:....|.:..:|..|........|:....|..|..|..|.
Zfish   366 SP-------AEREQEGKAE-----EKSEESVCSSAVADPAQTTTATPPEHHKLPVKDSSDVDPAP 418

  Fly  1192 -AEKRLLKGAPEAATSTSEPAVLGVAKKPPEGPAKLSHPQNTTVQASHQLGISSVRPLA--KK-- 1251
             ..|....|.|:.|.|:.:.....:.||.....||.:.|.:..::...  |..|..|||  ||  
Zfish   419 LCMKSPPSGLPQDAPSSEKAPAAPLLKKSTPARAKKTMPGSPRLELLK--GALSKSPLASLKKSS 481

  Fly  1252 DKEKTT------PTVQAPTPN------RIAAGKPE-PVRI------------------------- 1278
            |..:||      |.|.|..|.      .:::|.|| |||:                         
Zfish   482 DSSRTTEVSIRAPVVSARAPEVSSKAPEVSSGPPEVPVRVPEISSRAPEVPASFLEVSSKAPEVS 546

  Fly  1279 ----------------GIRRSLR---------EQLLARIKEAQAAEE-------NSGQP--TTQW 1309
                            .::.|:|         |..::.:|.:..|.|       :||.|  :::.
Zfish   547 VRAPEISSRAPEVPVSALKVSVRAPEISSRAPEVPVSALKVSVRASEISSRAPASSGVPEVSSRS 611

  Fly  1310 PTVL--------------------------------------EVDQFVKNVELEMFNSFGRDVGA 1336
            |.|.                                      ||::|..::|.||| |.......
Zfish   612 PEVSVLDPRCSPLLIRQNIRCLLTKVLLERLNQSDGLIFSENEVEKFAVDLEKEMF-SMCYTTDQ 675

  Fly  1337 KYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLDMIKK 1401
            :|::|.:.|...:||.:|:.|..::....:...:|:     .::.|::.|....:...|:.|  |
Zfish   676 EYRSKCQDLSLRLKDPQNKELCLQVLKGNLPVSRLI-----SVSQQDIVKETSADPEPQISM--K 733

  Fly  1402 SELDLLACAQNYVVKTHKGEEVIATK--VDVTLPEENVSEASSMADTKQTSLVSEP--STSTLER 1462
            .|...|:........:.......|.|  ::...|.|..|.||.:..|::..:.|:.  ..|::.:
Zfish   734 EESSFLSVDMEEATPSPPAAAAAAEKESMNTDTPTEEKSSASPLKQTEEREISSDSPHGMSSMLK 798

  Fly  1463 STSREKAGSSKEKRHKSHKHHHRKR-SRSRSNSRGRSVDKRHRRQHNEGGE------QPGSGERE 1520
            .|:.|         ||.|....:.| ...:|::.|....|...:.....||      ||.....:
Zfish   799 DTTAE---------HKLHVFDLKCRICTGQSSTDGNCDIKPKTKTETVEGESSERVVQPTDAALD 854

  Fly  1521 HRSREKQSRERDEIVPSPLPKKRDENDQSPV--------------PKKTAEKKTEASAYNLVDQI 1571
            ....|..:....|.|.|    |....|.|||              |:.....||.:|..  .:.:
Zfish   855 CSDLESPASPSAEDVES----KTHTVDYSPVVIPAVPLVSISGRDPRTAQYHKTASSPG--TESV 913

  Fly  1572 LESEKTVEQAANLGKPKPSPKPLPT---LPSS-LKAPEPMDNYSRYLHG--------------LT 1618
            ..|.:|...|.|..:.....:|.|.   ||.| |..|.|...::.|...              ..
Zfish   914 STSLQTPNPARNTTEAVNETQPTPVSVRLPKSILMKPSPSSLHTSYASNTRLADCDKGTRQFLAK 978

  Fly  1619 TSSLWSGTLKMIDLADFEIVMYPVQGNCHQLGNLMPSQMDVIGRITRVNVWEYIKKLKKSPTKEV 1683
            .|.||.|.|.|..:|.|....|.:.|:...|...:|..:.:.|||....||||:..:|.|..||:
Zfish   979 QSILWKGFLNMPTVAKFVTKGYLISGSPDILKEELPDTIHIGGRILPQTVWEYVDLIKTSEAKEL 1043

  Fly  1684 VIVNIFPASPSETYKFDLFFEYLDSRQRLGVLGVDSDQIRDFYIFPLGSGDKLPPALQTAEPVPF 1748
            .::...|||..|...:...|.|.:||:|.||:......|:|.|:.||.:...:|.||...|. |.
Zfish  1044 SLIRFHPASDEEEVAYVSLFSYFNSRRRFGVVSNICKHIKDLYLIPLCTKQSIPAALLPIEG-PG 1107

  Fly  1749 YEEAQRPNTLLGIIVRCLSKRPADAVP----------------STPSV-----PTPVPALSSKVA 1792
            .|: ..||.|:|:.| |...:..|..|                |||:.     |.|..|..:.|.
Zfish  1108 LEQ-DHPNLLIGLAV-CQKLKHPDRPPQDAAEKKSKSLIYKESSTPTSINDLGPYPTKACDADVF 1170

  Fly  1793 KRSRSSISYPAQSSP--KRKISTHSTSSKDDEFDIDAII------KAPIAKL----------QKT 1839
            ..|.||.|..:.|.|  |..:|.:..:|||....:..|:      |.|::.|          |:.
Zfish  1171 LNSHSSGSPSSSSVPVSKPSMSVNMGTSKDSTTPLQTILNTLFGQKKPLSDLNECKKVDDVQQED 1235

  Fly  1840 APKVVPQPSVPNDADEPYSPGGSDDELVPSAPQRPNDLERQVNEINKQIAAQQMEIAGLLKVEPT 1904
            |.|.|  ..:|.| .|.|.|..|::.:|..:|.:|.:                      ||:.| 
Zfish  1236 AGKCV--DDMPYD-PEDYDPAVSNEAMVSLSPPKPVE----------------------LKIPP- 1274

  Fly  1905 GSASSSNVLAAISIPANLSKILASIKDKTNLPSSADDGDEEYNPEDD---ITATSSFASKKPRSK 1966
                                          |..:.:|.|..|:||::   |....:..|..|:  
Zfish  1275 ------------------------------LAINNEDDDRPYDPEEEYCTIDHGETLRSNLPK-- 1307

  Fly  1967 GRLAHLSEAELLSMVPDNLAGVI--PRSSRTRHQLAQSPLTPTPLPPPP 2013
                 :|||:.:...|.....:.  |.......:: |:.||...:|..|
Zfish  1308 -----VSEAKSVEKPPTANTDIAYDPEDESVFEEM-QNYLTNNAIPHKP 1350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 37/163 (23%)
PHD_PHF3_like 914..963 CDD:277027 14/49 (29%)
BRK 1142..1186 CDD:197800 9/43 (21%)
TFIIS_M 1274..1396 CDD:284835 33/219 (15%)
SPOC 1623..1729 CDD:285043 35/105 (33%)
si:ch73-181d5.4XP_003201203.2 PHD_SHPRH 211..253 CDD:277022 14/47 (30%)
TFIIS_M 626..717 CDD:284835 16/96 (17%)
PHA03255 820..>963 CDD:165513 33/148 (22%)
SPOC 983..1089 CDD:285043 35/105 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7009
eggNOG 1 0.900 - - E1_KOG1634
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25216
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.900

Return to query results.
Submit another query.