DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5196 and zdhhc12b

DIOPT Version :10

Sequence 1:NP_650191.1 Gene:CG5196 / 41522 FlyBaseID:FBgn0038039 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001429595.1 Gene:zdhhc12b / 569129 ZFINID:ZDB-GENE-070705-356 Length:270 Species:Danio rerio


Alignment Length:225 Identity:65/225 - (28%)
Similarity:97/225 - (43%) Gaps:48/225 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LFLLLSTLATFNYVMATLTGPGLMPKQWHPKDPKDAQF--------------------LQYCKKC 96
            ||:||..::...|...:|..||.:     ..|..|.||                    |:.|..|
Zfish    48 LFVLLVLVSVLLYFAVSLMDPGFV-----LTDDCDLQFTLGIAEETQDMIPQTTKSIRLRRCGHC 107

  Fly    97 EGYKAPRSHHCRKCDRCVKKMDHHCPWINHCVGWANHAYFTYFLLFSILGSLQGTVVLCCSFWRG 161
            ...:..||.||:.|..||::.|||||||.:|||..||.:|..:|      ::|..|:|    | |
Zfish   108 LVQQPMRSKHCQTCQHCVRRYDHHCPWIENCVGERNHRWFVLYL------AVQFVVLL----W-G 161

  Fly   162 IYRYYYLTHGLAHLASVQFTLLSIIMCILGMGLAIGVVIGLSMLLFI--QLKTIVNNQTGIEIWI 224
            :|..:   .|.:| ||.....|.....:|| ..|:..::.|::||.:  .|..:..|.|..|...
Zfish   162 LYMAW---SGFSH-ASTWQQWLRTNGVLLG-AAAVVAILALTVLLLLGSHLYLVSLNTTTWEFMS 221

  Fly   225 VEKAIYRRYRNADCDDEFLYPYDLGWRANL 254
            ..:..|.::..||.:     |:|.|...||
Zfish   222 RHRISYLKHCGADEN-----PFDKGILRNL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5196NP_650191.1 DHHC 89..223 CDD:396215 46/155 (30%)
zdhhc12bNP_001429595.1 None

Return to query results.
Submit another query.